KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111970431
Entry
111970431         CDS       T05762                                 
Name
(RefSeq) WD repeat-containing protein 1
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:salp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:salp04990]
    111970431
Domain-containing proteins not elsewhere classified [BR:salp04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   111970431
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd WD40_Gbeta ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st CFAP251_N DSE1_N eIF2A Beta-prop_HPS5 Beta-prop_TEP1_C ASA1 Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N PAC11 Beta-prop_VPS8 Beta-prop_EIPR1 PEP5_VPS11_N WDR90_beta-prop_4th TRM82_WD Tricorn_2nd RMC1_N Beta-prop_NUP159_NUP214 NBCH_WD40 Beta-prop_SCAP PROPPIN Beta-prop_ELP1_1st WD40_like Beta-prop_ACSF4 Beta-prop_WDR11_1st DUF5711 WD40_RFWD3 DUF7165 Beta-prop_DCAF12 HPS3_N
Other DBs
NCBI-GeneID: 111970431
NCBI-ProteinID: XP_023852925
LinkDB
Position
LG11:41914075..41934762
AA seq 606 aa
MTYELKHVFASLPQMERGVAKVLGGDPKGNNFLYTNGKSVIIRNIDNPAIADIYTEHPHQ
VTVAKYAPSGFYIASGDVSGKIRIWDTTQKEHLLKYEYQPFGGKIKDIAWTEDSKRIACV
GEGREKFGAVFLWDTGSSVGEISGHSKIINSVDIKQTRPYRLITGSDDNXGAFFEGPPFK
FKFSSTDHSRFVNCVRFSPDGNRFCTAGADGQIFLYDGKTGEKLGALGGAKAHDGGVYAV
SWSPDSSQLISASGDKTVKLWDVGTSMALTTFNIGTDVMDQQLGCLWQKDHLLSISLSGY
INYLDKSNPDRPLRTIKGHSKSIQSLTVHKNKGRAYIYSGSHDGHINYWDAETGENDCFS
GKGHSNLVTKMAVDEADQLVTCSMDDTVRFTSVTKKEYSASNLVKMDVQPKHVSVATGGL
TLAVCIGQVVLLKNQKKVFMLDSLDYEPEAGAIHPGGSTAAVGGADGKVRLYSVQGNTLK
DEGKSMEAKGPVTDMAYSKDGAYLAVTDEKKVVTVFTVADDYSVKNDFYGHHAKVVTLAW
SPDNEHFASGGMDMMVYVWTVNDADKRLKIPDAHRLHHVSGLAWIDEHTLVTTSHDASIK
QWTLKF
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgacctatgaattgaagcatgtgtttgccagcctcccgcagatggaacgaggagttgcc
aaagtccttggtggagatcccaaaggcaacaacttcctctacaccaatgggaagagtgtc
atcatcaggaacatagataaccctgccatagctgacatctacaccgagcaccctcatcaa
gttactgttgccaagtacgctcccagtggcttctacattgcgtctggagatgtgtctggt
aagatccgtatctgggacactacccagaaggagcaccttctgaagtacgagtaccagcct
ttcgggggcaaaatcaaggacatcgcctggactgaggacagcaaaaggattgcttgtgtg
ggagagggacgtgagaagtttggggctgtgttcctgtgggacactggctcctcagtgggc
gagatctcgggccactccaaaatcatcaacagcgtggacataaagcagactcgcccctac
cgcctcatcaccggcagtgatgacaactgrggggccttctttgagggaccccctttcaag
ttcaagttctcaagcacagaccacagccggtttgtcaactgcgtgcgtttctctccagac
gggaaccgcttctgtacggctggcgctgatggtcagatcttcctatacgacggaaagact
ggcgagaagcttggggctctgggcggagcgaaggcccacgatggaggagtctatgccgtg
agctggagccctgacagctcccagctcatctctgcctcgggtgacaagactgtgaagctg
tgggatgtgggcaccagcatggccctcaccaccttcaacattggcaccgacgtcatggac
cagcagctgggctgcctmtggcagaaggaccatctgctcagcatatccctgtcgggctac
atcaactacctggataagagcaaccccgaccggccgctccgcaccatcaagggtcacagc
aaatccattcagtccttgacagttcacaaaaacaaggggcgggcttacatctactctggc
agccatgacgggcacatcaattactgggatgcggagaccggggagaacgactgcttctca
gggaagggccacagcaaccttgtcaccaagatggcggtggacgaggccgaccagctggtg
acctgcagcatggatgacacggtccgcttcaccagcgtgacaaagaaagaatacagtgct
tccaacctggtaaagatggacgtccagcctaaacatgtttccgtagcaacagggggactc
acattagccgtgtgcattggacaggtggtgttgctgaagaaccagaagaaggtgttcatg
ctggacagtctggactacgagcctgaagcaggagccatccacccagggggcagtactgcg
gcagtgggcggggcagatgggaaggtccgcttgtattctgtccaaggcaacactctgaag
gatgaggggaagagcatggaggccaaagggccagtcacagacatggcctactcaaaagac
ggagcctacctggccgtcactgacgagaagaaggtcgtcacagttttcaccgtggcggat
gattactcggtcaaaaatgatttttatggacaccacgctaaagtagttaccttggcctgg
tcccccgacaatgagcactttgccagcggtggaatggacatgatggtctacgtttggaca
gtgaatgatgcagacaagaggctgaagatcccagacgcccacaggttgcaccatgtcagt
ggcctggcctggatagatgagcacacgctagtgaccacctcccatgatgccagcatcaag
cagtggactctaaaattctga

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