Salvelinus sp. IW2-2015 (Arctic char): 111970437
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Entry
111970437 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: syntaxin-18-like
KO
K08492
syntaxin 18
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04130
SNARE interactions in vesicular transport
salp04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111970437
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111970437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111970437
Membrane trafficking [BR:
salp04131
]
SNARE
Syntaxin (Qa)
Stx-rER
111970437
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
ACR_tran
DUF6331
DUF4559
Motif
Other DBs
NCBI-GeneID:
111970437
NCBI-ProteinID:
XP_023852932
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All DBs
Position
LG11:complement(42456912..42499992)
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AA seq
330 aa
AA seq
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MAVDITLLFKASVKTVKTRNKAMGVVFDSPKDEIFKSRPKNGFSLKAKEVISNITKLKDF
LLQHRKDYVNAGSLISSDLTRMTDNERDQIDQDAQIFMRTCSEAIKQLRSEAEKQVISTQ
IKEHRGAVLDLIEMYLKGVCKLYSQQRAIRVKRVVDKKRLSRLEPEHYHSRVVVEKSPQV
EQHSEEKTSKEESSSGERSVMEVPENNVSLWEEGQGRVDDELSPEEMQMFEQENQRLVSE
MSNLVDEVRQIEGKVVEISRLQEIFAEKVLMQETEIDSIHQLVVGATENVXEGNEDIREA
IQNNAGFRVWILFFLVMCSFSLLFLDWYDS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgatataactttactgttcaaagccagtgtaaaaacggtcaaaacccgaaat
aaagctatgggagtagtgtttgattcgcctaaagatgaaatattcaagagcagaccgaag
aacggattttctctcaaggcgaaggaagtgatctccaacatcaccaagctgaaagacttt
ctactgcagcacaggaaggactatgtgaatgctggaagtctcatctcatcagacctaaca
cggatgacagacaatgagcgagaccagatcgaccaggacgcccagatcttcatgagaacc
tgctctgaggccatcaagcagctccgctctgaagctgagaaacaggtcatatcgacccag
attaaagagcacaggggggcggtcctcgacctaatcgagatgtatttgaaaggagtatgc
aagctttattcccagcagagggctatacgagtgaagagagtggtagacaagaagagactg
tcccgactagagccagagcactaccacagtagggtggtggtggagaaaagcccacaggtg
gaacagcacagcgaggagaaaacatccaaggaggagagcagcagtggtgagcggagcgtg
atggaggtcccggagaacaatgtgagcctgtgggaggagggccagggtcgtgtggatgac
gagctctcacctgaggagatgcagatgtttgaacaggagaaccagaggctggtgagtgag
atgagcaacctagtagatgaagtcaggcaaatcgaaggcaaggttgttgagatctcgcga
ctccaggagatttttgcggagaaggtgctaatgcaagaaactgagatagacagtatccat
cagctagtcgtgggagccactgaaaatgtcnnagagggaaacgaggacatccgagaggcc
atccaaaacaatgctggattccgtgtctggattctcttcttcctcgtcatgtgctccttc
tctctgctcttcctggattggtacgacagctaa
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