Salvelinus sp. IW2-2015 (Arctic char): 111970449
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Entry
111970449 CDS
T05762
Name
(RefSeq) homeobox protein TGIF1-like isoform X1
KO
K19553
homeobox protein TGIF2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111970449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111970449
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
111970449
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
111970449
NCBI-ProteinID:
XP_023852956
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All DBs
Position
LG11:complement(43785926..43793558)
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AA seq
484 aa
AA seq
DB search
MKPLKRALEEEQIQELSSAMSDSDPFEDDGFPLDLSGGGVGSGKRRRRGNLPKEAVIVLR
TWLYEHRYNAYPSEQEKLSLSDQTSLSVLQICNWFINARRRLLPDLLRKDGKDPTHFTIS
RRAGKGEGRSSTGGGGSSPESPTSSVPSPALPPLRPTVIRPAPTLDLSLLGNTATAILTG
AGYPGQEGCCVQALMQLDMHVLLREAEEKGSTVISASPTGGLFNTPPPTPPELCPGQDFS
DLRLLVXAALQRAAEHESQTKATTEATVCSSAMGPTLPPEPSQASLNSPREQSPTEKVVV
SPVSVPSPVTVSSAPKLTPAFAFIPAPSLPPRSAQIPVLVPVSTPVPAFIPAPTKPPVPA
LSPVQTFTPALTLSPVPISSPTLALVQSTSASPHPIPRPFFLQQQQCPEGSVGGQCVEHG
SQRCSSPTAWSRGTDSHSHSVGGAAHPACCQRDSQLEPRPHPGLYVGAHQAVYISENIFL
SSTH
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccctaaaacgagctctggaagaggagcagatacaggagctgtcgtcagccatg
tctgacagcgacccctttgaggatgacggctttccccttgacctgtcaggaggcggcgtg
ggctcgggcaagcggcgtcgccgcggcaacctgcccaaggaggcggtgattgtgctgcgg
acctggctgtacgagcaccgctacaacgcatacccttcagagcaggagaaactcagcctg
tcagatcagaccagcctctccgtgctacagatatgcaactggttcatcaacgcccgtcgc
cgcctcctccctgacctactccgcaaggatggcaaagaccccacccatttcaccatctcc
aggcgggcaggaaaaggtgagggtcgctcatccactggtggtggaggtagctcccctgaa
agccccacctcctcggtcccctcaccagccctgcccccactccggcccacggtcatccgg
ccagcccccacgctggacctcagcctcctgggcaacacagccacggccattctgacgggt
gccggctacccaggccaagagggctgctgcgtccaggccctgatgcagctggacatgcac
gttctcctgagggaggccgaggagaagggctctacggttatcagcgccagtcccactggc
gggctattcaacacgccaccccccacccctccggaactgtgccccggccaggacttcagt
gacctgaggctgctggtgyacgcagctctccagagggccgctgagcatgagagtcagacg
aaggccactacagaggccacggtctgcagcagtgctatgggtccaacccttccaccagag
ccgagccaagcttcactgaactcgcccagagagcagagtcccacagaaaaggttgtggtg
tccccagtttcagtcccaagccccgtcacggtctcttcagcacctaaactcaccccagcc
tttgccttcattcctgctccaagtctgcctccccgctctgcccaaattccagtcctagtg
ccagtttcaacccctgtcccagccttcatccctgcaccaaccaaaccccctgtgccagcc
ctaagccctgttcaaaccttcacccctgcactaactttatcccctgtcccaatctcatcc
ccaactttagccctagtccaaagcacctctgccagccctcaccccattcctaggcctttc
ttcctccagcagcagcagtgtccagagggctcagtcggtggccagtgtgtggagcatggt
tcacagcgatgttccagtccgacagcctggtcccgtggcacagactcccatagccacagt
gtggggggcgcagcacaccctgcatgctgtcagcgagacagtcaactagagccacggcca
caccctggtctgtatgtgggggcgcaccaagctgtgtatatatctgagaacatattcctt
tcatcaacccactga
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