Salvelinus sp. IW2-2015 (Arctic char): 111970455
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Entry
111970455 CDS
T05762
Name
(RefSeq) eukaryotic translation initiation factor 4B isoform X1
KO
K03258
translation initiation factor 4B
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
111970455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111970455
03012 Translation factors [BR:
salp03012
]
111970455
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111970455
mRNA cycle factors
Stress granule specific factors
111970455
Translation factors [BR:
salp03012
]
Eukaryotic type
Initiation factors
eIF-4
111970455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
111970455
NCBI-ProteinID:
XP_023852965
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All DBs
Position
LG11:44518555..44555879
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AA seq
681 aa
AA seq
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MAAPAKKKGNKKGKTLTLTDFLAEDNGSGGNAPPPQPSYAKSTSWADETDDLEGDVSTSW
HSGEDSYRAPAIDRNILPTAPRSAREPNVDRSRLPRSPPYTAFLGNLPYDVSEESIMDFF
RGLAISAVRLPREPSNPERLKGFGYAEFDDVDSLLRALTLNEENLGNRRIRVDIADQSND
KEGRDNGQMGGRDRMGRMGDMGGPDKTDSDDWRARPTADADDGPPKREESAFGSRDRYGD
RDGPRRDNDRGFGGDRDRGFGGDRDRGFGGDRDGGRDRGFGGRDRYDDRGGESGAFGSRR
DRDDGGRRAFGSGYRRDDDGGGGGRYGERDRYGGDREDRYERREERGGEGGTTQRPKLVL
KPRSTPKEEEQARSGGGGAAPAAPATAPSSGRASIFGAAKPVDTAAKEREVEEKLQRQLE
EDKTRGFDRKPRDRDRDPSWRSEEPPSERPATRSRTGSESSQTGSTSGGRVSRRRESERS
VENEVFSGKEDDPPSPGARPTSANSSTSSSKEPLKVMPAPPPKENAWAKRPAVSAGSTPV
SPSDAACPKLSSSSADERGSGREENKVDGVRRDRGPPRGRGGAAGPGAGRGRGEGANRDR
RREEDRKDNRRDRDSRPAPEPKKYEESPTPVSPGVTSSALDPPHSGFGFSSNSHTKFSSA
SKYAALLMDSEQGDDAEDSVE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccagctaagaagaaggggaataagaaggggaagaccctgaccctcactgac
ttcctggcagaggacaatgggagtggaggcaatgctccaccaccgcaacccagctatgcc
aagtccaccagctgggctgacgagacggatgacctggagggagatgtgtccacctcctgg
cactcaggggaggacagttatcgggccccggccatagatcgcaacatcttgcccacggcg
ccacggtcggcccgcgagcccaacgtggaccggtcacgcctcccccgcagccccccctac
accgccttcctgggcaacctgccctacgacgtctccgaggaatctatcatggacttcttc
cggggcctagcgatcagtgctgtgcgcttgccacgggagcccagtaacccagagaggctg
aagggctttggctacgccgagtttgatgatgtggactccctcctgagggcgctgactctc
aatgaggagaacctgggaaaccgcaggatccgggtggatattgcagatcagtccaacgac
aaggaggggagagataatggccagatgggtggacgggacaggatgggccgtatgggagac
atggggggccccgacaagacagacagtgacgactggagggcccggcccactgctgacgct
gatgacggacccccaaagagagaggaatccgctttcgggtcacgcgaccgctatggagac
cgtgacgggccgagacgggacaatgaccgcggatttggcggcgaccgggaccgcggattt
ggcggcgaccgggaccgcggatttggcggcgaccgggacggcggcagagaccgtggcttc
ggcggcagagaccgctatgacgaccggggaggtgagagcggagcctttggctcccgcagg
gaccgggatgatggcgggcgacgtgcctttggcagtggctaccgccgtgatgatgacggg
ggtggtggtggccgctacggggaacgggatcgctacggcggggacagagaggaccgatat
gagaggcgcgaggagagaggaggtgagggtggtaccacccagagacccaagctggtcctg
aagccacgcagcacgcccaaggaggaggagcaggcccgcagcggtggtgggggagctgcc
ccagctgctccagcgactgcccccagctctggccgtgcctccatcttcggagcagccaag
cccgtggacactgcagcyaaggagcgggaggtggaggagaaactccagaggcagctggaa
gaggacaagaccaggggctttgataggaaaccccgcgacagagacagggacccaagttgg
aggagtgaggagccaccttctgagcgacctgctacacgctcccgcacaggaagtgagtca
tcacagacgggaagtacatctggaggaagagtctcgcggcgcagagagagcgagcgatca
gttgagaatgaagtattcagtggtaaggaggacgaccctccctctcccggagctcgccct
acttccgccaactcttccacatcttcctccaaggagcccctcaaggtgatgcccgcacca
ccacccaaggagaatgcctgggccaagcgccctgcggtgagcgcagggtccacccctgtc
tcccccagtgacgcggcatgtcccaaactgagctcaagttctgcagatgaaagaggatct
ggaagggaagagaataaagtggacggtgtgcgtcgggaccggggccccccacgggggaga
gggggggctgcggggcctggagcagggcggggccgaggagaaggggccaacagagatcga
cgaagggaggaagacagaaaggataacagaagagaccgggactcaagaccagcaccagag
ccaaagaaatacgaagagtccccaactcccgtgagtcctggtgtcacatcaagtgctctt
gacccaccccatagtggatttggattttcctcaaactcccacacaaaattcagctcagcc
agtaaatacgccgctttgctaatggacagcgagcaaggagacgacgcggaggacagcgta
gaataa
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