Salvelinus sp. IW2-2015 (Arctic char): 111970541
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Entry
111970541 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: acid-sensing ion channel 1B
KO
K04829
acid-sensing ion channel 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111970541
Ion channels [BR:
salp04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
111970541
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GFIT
Motif
Pfam:
ASC
Motif
Other DBs
NCBI-GeneID:
111970541
NCBI-ProteinID:
XP_023853129
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Position
LG11:complement(50773297..50890237)
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AA seq
562 aa
AA seq
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MPVRIMCSISFSADDEPRGLGKDGFDDRYRKGIKSGDGGGRGDYREDGCDELDVYDEDEE
DAHELDSLAAFFDGCSLHGANHIFAEDKKFSVSQGLWAIVFLLALSAFLLQVFDRVIYYL
SYDHVTMLDERNAPNLTFPAVTFCNYNYFRRSQISYSDLLFMGQLLGYEDNMAPGIPLAP
EPDRQGSRFSLDEFHNRTRHRIEDMLLECNFRGKECGPEAFREIFTRYGKCYTFNSGQDN
RPLLVTMKGGMGNGLELMLDIQQDEYLPVWGETDETSFEAGIKVQIHTQDEPPFIDQLGF
GVAPGFQTFVSCQEQRLTYLPPPWGDCKSTPMDSDFFNSYSLTACRIDCEXRYLVRNCNC
RMVHMPGDAPYCTPEQYKECADPALDFLVERDNXYCVCETPCNMTRFGKEKCPSSRFRSK
ASAKYAGKEVNNKDCXQLNMNNILVLDIFFEALNYETXEQTKAYEFAGLLGDIGGQMGLF
IGASILTILELFDYLYEVIKYKLCRCSNKKHKHNNNNNRGAVLSLENVKRHTPCENLRTP
GTYPANMLPHHPAQGNFEDFTC
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtccgcatcatgtgcagcatctccttctcggccgacgacgagcccagaggactg
ggaaaagacggcttcgacgaccgctaccgcaaggggatcaaatccggtgatggcggcggt
cggggggattaccgggaggacgggtgtgatgaattggacgtgtatgatgaagatgaagaa
gacgcccacgagttagacagcctagctgcgttcttcgacggctgctcgctccacggcgcc
aaccacatattcgcagaggacaagaagttcagcgtgagtcagggcctctgggccatcgtc
ttcctgctagctctctctgctttcctcctccaggtgttcgaccgtgtcatctactacctg
tcctacgatcacgtcacaatgctggacgagagaaacgccccgaacttgaccttcccggcc
gtcaccttctgtaactacaactacttccgccgctcccagatcagttatagtgacctgctg
ttcatgggccagctgctggggtatgaagacaacatggcccctgggatccccctggccccc
gagcccgaccgccagggatccaggttcagcctcgatgagttccacaaccgcaccagacac
cgtatagaagatatgctgctggagtgcaacttcagagggaaagagtgtggcccggaggcc
ttcagagagatcttcacccgttatgggaagtgctacacattcaactcgggtcaagataac
cgcccgctgctggtgaccatgaagggagggatgggtaacggactggagctgatgcttgat
atccaacaagacgaatacctgcccgtctggggagaaacagatgagacgtcatttgaggca
ggcatcaaggtccagatccacacccaggacgagccacccttcattgaccagctgggtttc
ggagtggccccgggcttccagaccttcgtatcctgtcaggaacaacggctgacgtacctg
cctcctccgtggggcgactgcaagtccactcccatggactctgacttcttcaactcctac
agcctgacggcctgccgtatcgactgtgagncgcgctacctggtgagaaactgtaactgc
cgcatggtacacatgccaggagatgccccatactgtaccccagagcagtacaaggagtgt
gccgatcctgccttggacttcctggtggagagggataatngatactgcgtgtgtgagacg
ccctgcaacatgacgcgctttggaaaggagaagtgtccttcgtcaagattccgcagtaag
gcctcagccaagtacgctggcaaggaagtaaacaacaaggactgctagcaacttaacatg
aataacatcctggttctggatatcttcttcgaggctctgaactacgagacantcgagcag
acgaaagcttacgagttcgctggtttgctgggtgatattggtggacagatgggactattc
ataggagccagtatcctcaccatcttggagctctttgactacctatatgaggtgatcaag
tacaagctgtgtcgatgctcaaataagaaacacaaacacaacaacaacaataaccgggga
gcagttctgagtctggagaacgtcaaacgccacacgccctgtgagaacctgcgtacgccg
ggtacgtatcctgccaacatgcttcctcaccatccagcacagggcaacttcgaagacttc
acatgctga
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