Salvelinus sp. IW2-2015 (Arctic char): 111970560
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Entry
111970560 CDS
T05762
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00310
Lysine degradation
salp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
111970560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111970560
03036 Chromosome and associated proteins [BR:
salp03036
]
111970560
Enzymes [BR:
salp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
111970560
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
111970560
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
111970560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
zf-C2H2_6
zf-C2HE
zf-C2HC_2
zf-C2H2_11
zf-C2H2_3rep
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
111970560
NCBI-ProteinID:
XP_023853148
LinkDB
All DBs
Position
LG11:complement(11442160..11459707)
Genome browser
AA seq
1734 aa
AA seq
DB search
MAVPGGTMETLADIPHHVWKSLSDGLRLSPSAVDQSRIGVWASRPIPKGKRFGPFVGEKK
KRSQVSSNVYMWEVYFPARGWMCVDTTDPMKGNWQRYVNWANSTQEQNLFPMEINRAIYY
KVLRPIGPGDELLVWYNGEDNPEITAALEEERGSSLSKKNSTRAKRARRKLLEGARQAGL
GAFRGPRQTGVTKPIVREMWDTEEGPNEEDERLSPSPGPSKGLGRAPPWGGTASLKPSSS
QQQHSRVLSLLLKLSQQERSEQPDLPLSHSSPGEVGPGSLQTASSLPRPEPEADPYLDPD
LEGDPHGEESHPCQHCERHFSTKQGLERHTHIHATANQQTHTFKCRYCGKSFGSQVGRRR
HERRHENGPKNKGQRPGSLAGTATLLXPLGQAXXSSPDCXTVSGHYVVXGSPVPGGXMXS
XZVVRKDPAAESDXPFIVDENGETKELHPCKYCNKAFGTHTNMRRHQRRIHERHLLPKGV
RRKGMLLQESPXQXXXLPEQSPXXSPPXVYVPSADTEDEGDREEYMVDISBNISENLSLY
IDGKILSASSVSGCEVIEVDSSSAALFGLDAVVISPNQISQAFKVDTRTCAVKQVSNLGQ
PTTKRRTSTPPLMPSLKMESENGSSSASSSSSTSSSSALLVESLFPQSSDSLAFQKEKTI
YLSPKLKQLLQTQTDGQKPTIALIADSHRLAPPLSVASLPATSGRFKRRTASPPSSPQLS
PALKADGCKSEAGVSSYTLKVPKLESLGMSSAWSLSSKEERDTMSPSGKDGCSWSASRSG
GNSCNQQPLDLSSGISKWSDGFNKTPREEVLDLSMSRKSTAEPESKGSPAPTQPHTKKKK
PNTSMLEKVLMNEYAGLNPAGEEGSCALGSPDSQYTASSGTGTASHSPSSNMPFESADPS
PPSLTPVTMNPSSPCVSSLTSPTPPPPVLPSMPSPDCPTSSSLPLLSPKMSPRSIDHCED
ESVCVSNSTTAETILAAVSNSYGDEEHVTKPVDPTHNTDPIIGKALSNPSTESSSVSDVV
PVSLSSAQSKPAKSGNHSFLDIQINPDLEPIITAGQGKSQCSELPVLSPVKESPPTSSST
SPVGISDVPAPSVVSPASLSSTVIKEEVQHMDQLADLGLPPGATVSSPPSAAAEKPSEEV
VEEEGLEPDPFSKSFVCNVCEDPFRSIKELSRHIVEHAAEWPYRCEFCVQLFGNAPALLE
HRTALHGVGRIFVCSFCSKEFAFLCNLQQHHKDLHPSQPCTHAAVESSKLRPQNYTDPAR
AKEESNPSSTTGPESSAEAASSQGVSDVKEEEQPDTNGKHEEAGPEDPTEELYTTIKIMA
SEGGKPKGPDVRLGINQHYPSFKPPPFPYHNRTAAXSVASATNFTTHNIPQTFSTAIRCT
KCGKSFDNMPELHKHILACANASDKRRYTPKKNPIPLRQIVKPQNGSLSPASAANAGHNA
FRRMGQPKRLNFNHEPPGKTKMSSLSRKKNQLVQKAIAQRNETVATVKAPSQVKEEEPQE
QEVHVCPHCSREFTYPASLSKHIAGSCPMKPVSKKAKRGAATEATPAVDINMSLRRRTTD
SEIQQPEPAEPVPKTLSKTRARNSGPGPAEAEAPPPVGKGKMAATQVCTKRPASFPAATV
SLSKKSKKGKVQSLPPTPLPSESPSDSSPRPAAQTKQRMGKEVPPKKGAEVKSPQQQQSQ
VPPKKERFSLRARERAVGPVTRSLQMANTAAPVEVKTEDLSSQKPEETQEYLLK
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcctggagggacaatggaaacgcttgctgacattccacaccatgtgtggaag
agcttgtccgatggcctgagactaagcccctctgctgttgatcaaagtcgtattggtgtc
tgggcctctaggccgattcctaaaggcaagaggttcggcccttttgtaggagagaagaaa
aagcggtcccaggtgtccagcaatgtttacatgtgggaggtgtattttccagccaggggc
tggatgtgtgtggataccacagaccccatgaaggggaactggcaacggtatgtaaactgg
gctaactccactcaagaacagaaccttttccccatggagataaaccgagccatttactac
aaagtgttacggccaattgggccaggggatgagctgctggtgtggtacaatggggaagac
aaccctgagataacagctgcattagaggaagaaagaggcagcagtctgagcaagaaaaat
tcaaccagggcaaagcgagccagaagaaagctgttggagggagccagacaggctggtttg
ggtgcattccgtgggcccaggcaaacaggcgtaaccaaacctattgtcagagagatgtgg
gacacagaggaaggtccaaatgaggaagatgagagactctccccatcaccagggccttcc
aagggactcgggagagctcccccatggggaggaacggcctctctcaagcccagttcatct
cagcagcaacacagcagagtgctcagtctgctactgaagctgagccagcaggagaggagt
gagcagcctgatctgccactaagccatagcagcccaggtgaggtggggcctgggagcctt
cagactgcctcatccctaccaaggcctgaaccagaggctgacccatacctcgaccctgac
cttgaaggtgacccccacggagaggagtcccatccctgccagcactgcgagcgccatttc
tccaccaaacagggcttggagcgccacacacacatccatgccacygcaaaccagcaracg
cacacrttcaaatgccgttactgtggcaagtccttyggctcgcaggtgggrcgtcggcgg
cacgagcggaggcatgagaacgggccaaaraacaarggccaaaggcctggctcactrgct
gggactgctactttactcastcctctggggcaggctgrykgttcsagcccagactgtrsc
actgtctctggccactaygttgtcakgggstcccckgtccctggaggacytatgsrgagc
cytsaggttgtgaggaaggaccctgcggctgagagtgaycrgccstttatcgtggatgag
aatggwgagacaaaggagcttcatccttgcaagtactgtaataaggctttcggcactcac
accaacatgcgcagacaccagcgcagaatccacgagcgccacttactgcccaagggtgtg
cgcaggaaaggcatgctgctgcaggagagcccrymwcagcwgcakcrtctgcctgarcag
tccccymgtgycagcccaccccyygtctatgtgccyagtgcagacactgaggatgagggg
gaccgagaggagtacatggtcgacatatccrataacatctcrgagaatctcagcctgtac
atcgacggcaagatcctgtccgctagttcagtcagcggctgtgaggtgatcgaagtggac
tccagttctgcagcactgtttggtctcgatgcagtggtcatcagccccaatcagatcagt
caggctttcaaagtggacaccaggacctgtgctgtgaagcaggtctccaacctcggccag
cccacgacgaaaaggagaacgtcgacacccccgctcatgcccagtcttaaaatggagtct
gaaaatgggtcctcctctgcctcctcttcctcctccacgtcttcctcatctgccttgttg
gtggaaagtctcttccctcagtcctcagactcattagcatttcaaaaggagaaaactatc
tatctgtctcctaagctcaaacagctcctccagactcagacagacggtcagaaacccacc
atcgccctgatagcagacagccacagattagctccccctctctccgttgcgtccctgcct
gcaacctcaggcaggtttaagagaagaacggcttcccctccctcatctccacagctcagc
cctgcgctgaaagcagatggctgtaagagcgaggctggggtctcgtcgtacaccctcaag
gtgccaaagctggagagcctgggcatgtcctctgcctggagtctgtccagcaaggaggag
agggacaccatgagtcccagcgggaaggacgggtgcagctggtctgcctctcggagcgga
gggaactcatgtaatcagcagcccttggacctttccagcggcatcagtaaatggagtgac
ggcttcaacaagacgcccagggaggaagtgctggatttaagcatgagtcggaagagtaca
gcggagccagagtccaagggaagtccagctccgacacagccccacaccaagaagaagaag
cccaataccagtatgctagagaaggtgttgatgaatgagtacgctggcttaaacccagca
ggagaggagggctcttgtgccctgggaagcccagattctcagtatactgcaagcagtggt
acaggcacagcttctcacagtccctcttccaatatgccctttgaatcagccgatccctcc
cccccctctctaacccctgtcactatgaatccctcctccccctgcgtctccagcctcacc
tctccaactccacctccccctgtcctaccctctatgccctcaccagactgccccacttcc
agctctctccctctcctctcccctaaaatgtcccccagatccattgaccattgtgaggac
gagtcagtttgtgtatctaactctactacagcagagacaatattagctgcggtaagtaac
agttatggagatgaggaacatgtcactaagccagtagaccccacccacaatacagatccc
attatcgggaaagctttatcaaacccctctacagagtcctcctcagtatctgatgttgtc
cctgtgagtctatcctcagcacaatctaaacctgctaagagtgggaaccacagtttctta
gatatccaaattaacccagacctggaaccgattattactgcgggacaggggaaatcccaa
tgctctgaactccctgttttatcacccgtaaaagaatccccccccacttcctcatcgacc
tctcctgttggaatatcagatgtcccagctccgtcagtggtctccccagcatcactctct
agcactgtgattaaagaggaggtccagcacatggatcagctggctgatttaggccttcct
cctggtgccacagtgtcttcacctccatctgctgctgctgaaaagccctctgaggaggtg
gtggaggaggagggattggagccagaccccttcagtaagagctttgtgtgtaacgtgtgt
gaggatccgttccgctccatcaaagagctcagtcggcacatcgtggagcacgccgctgag
tggccctacaggtgtgagttctgtgtgcagctgttcgggaatgctccggccctgctggag
caccgcacagccctccatggtgtgggacgcatctttgtctgctccttctgctccaaggag
ttcgccttcctctgcaacctccagcagcaccacaaagacctgcatcccagccagccgtgc
acacacgcagcggtggagagcagcaagctgaggccacagaattacacagacccagccagg
gccaaagaggagagtaacccctcctcaaccacagggcctgagtcctctgctgaagctgcc
tcctcccagggggtctctgatgtgaaggaggaggagcagcctgatactaacgggaagcat
gaagaggctggaccggaggacccaactgaagagctctacactacaataaagatcatggct
tctgagggaggcaagcctaaaggcccagacgtacgcctgggcattaatcaacactacccc
agtttcaagccaccccccttcccctaccacaaccgcacsgctgcagrctcrgtggcctcg
gccaccaacttcactacccacaacatmccccagacattcagcactgccatccgctgcacc
aaatgcggcaagagtttcgacaacatgcccgagctgcacaagcacatactagcctgtgcc
aacgccagtgataagaggcggtacactcccaagaagaaccccatccctctcagacagata
gtgaagccccagaacggctctctgtcgcctgcctctgctgccaacgcagggcacaacgcc
ttccgcagaatgggccaacccaagaggctcaacttcaaccacgaaccgcctggcaaaacc
aagatgagttccctcagtaggaagaagaaccagctggttcagaaggccatcgctcagagg
aatgagactgtagctactgttaaggcccctagccaggttaaagaggaggagccgcaagag
caggaggtccacgtatgccctcactgcagcagagagttcacctaccctgccagcctcagt
aaacatatagcaggcagctgtcccatgaagccggtctctaaaaaggccaaaaggggagcc
gcaacagaggcaacaccagctgtagacataaacatgagccttcgacggagaaccacagac
tctgagatccagcagccagagccggctgagccggttcccaaaacacttagcaaaactcgg
gctcgcaactctggacctggccctgcggaggctgaggccccaccaccggtgggtaaagga
aagatggctgccacacaggtgtgcaccaagaggccagcctctttcccagctgccacagtt
tctctcagcaagaaaagtaaaaaaggcaaagttcaatcgttaccccccaccccgttgccc
tcagagagtcccagtgactcttcaccgcggccagcagctcagacaaagcaacgcatgggc
aaggaagtgccacccaagaagggagcggaggtgaaatcgccccaacagcagcagtctcag
gtgccgcctaagaaagaacggttctctctgagagcgagggagagagctgttgggccggtg
actcggagcctgcagatggccaacactgcagctcctgtggaggtgaaaacagaggacctc
tccagccagaagcctgaagagacccaggaatacttgctgaaatga
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integrated database retrieval system
