Salvelinus sp. IW2-2015 (Arctic char): 111970690
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Entry
111970690 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase NRDP1-like
KO
K11981
E3 ubiquitin-protein ligase NRDP1 [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111970690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111970690
04121 Ubiquitin system [BR:
salp04121
]
111970690
03029 Mitochondrial biogenesis [BR:
salp03029
]
111970690
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111970690
Membrane trafficking [BR:
salp04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
111970690
Autophagy
Mitophagy
PINK1-Parkin associated proteins
111970690
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111970690
Mitochondrial biogenesis [BR:
salp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
111970690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP8_interact
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-rbx1
zf-RING_6
zf-Nse
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
U-box
Sina_ZnF
zf-ANAPC11
Laminin_II
zf-RING_10
zf-TRAF
DUF4795
zf-RING_16
LXG
SlyX
DUF641
BLOC1_2
Sos7
Med9
zf-TRAF_2
zinc_ribbon_16
Motif
Other DBs
NCBI-GeneID:
111970690
NCBI-ProteinID:
XP_023853240
LinkDB
All DBs
Position
LG11:33271219..33288377
Genome browser
AA seq
318 aa
AA seq
DB search
MGYDVTRFQGEVDEDLLCPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQICPVDRSVV
TLAHLRPVPRIMRNMLSKLQITCDNAGFGCIAVLRLDQLQSHLRDCQHNPKRPFQCEQGC
GLEMPKDEVPSHNCIKHLRSVVQQQQGKVTDLDKTTAEHKHQLAEQKRDIQLLKAYMRAI
RSANPNLQNLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLIDSGCPP
SIVNDLIENAHERNWPTGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGEDM
ILEPGLVMIFAHGVEEIL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgggctacgacgtcacccggttccagggggaagtggatgaggacctgctgtgccccatc
tgcagtggagtcctggaggagcccgtgcaggcccctcactgcgagcacgccttctgcaat
gcctgcatcacccagtggttctctcagcagcagatatgccccgtggaccgcagcgtggtg
acactggcccacctgcgccccgtgccccgcatcatgcgcaacatgctatccaagctgcag
atcacctgcgacaacgccggcttcggctgcatcgccgtgctgcgcctcgaccagctgcag
tcgcacctcagggactgccagcacaaccccaagaggcccttccagtgcgagcagggctgc
ggactggagatgcctaaagacgaggtacccagccacaactgcatcaaacatctgcgcagc
gtggtgcagcaacagcagggcaaggtcaccgacctggacaagactactgctgaacacaag
caccagctagcagagcagaaacgggacatccagctgttgaaggcgtacatgagagccatc
cgcagtgccaaccccaacctgcagaacctcgaggagaccattgagtacaatgagatccta
gagtgggtgaactccctccagccagcgcgtgtcacccgctggggcggcatgatctcgaca
ccagacgctgtcctccaggcggtcatcaagcgctcgctcatcgacagcggctgcccgcct
tccattgtcaacgacctgatcgagaacgcccacgagaggaactggcccaccggcctggcc
acgctggagacgcggcagatgaaccggcgctactatgagaattacgtggccaagcgtatc
cccgggaaacaggcagtggtggtgatggcctgtgagaaccagcatatgggtgaggacatg
atcctggagccaggcctggtcatgatcttcgcccacggggtggaggagatactatga
DBGET
integrated database retrieval system
