Salvelinus sp. IW2-2015 (Arctic char): 111970722
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Entry
111970722 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04260
Cardiac muscle contraction
salp04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111970722
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
111970722
04261 Adrenergic signaling in cardiomyocytes
111970722
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111970722
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
111970722
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
MCP-like_PDC_1
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
111970722
NCBI-ProteinID:
XP_023853261
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Position
LG11:complement(40336939..40442363)
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AA seq
1148 aa
AA seq
DB search
MLVKMLWNWKILVSHVCCASLLLFWIILGTAVVDVIGSQQGIPLSVVKLWASAFGGEIKS
ISAKYSGSQLLQKKYKELEKSVRVEEIDGMKVVKNLSKKMEDMFRKKKEAIRRLVEAAEE
AHLQHAGKPRATVDKDKWNSYAQCIVPLFFLKIGNSLGQQITCGHPVNSWTYIIYEYFNA
YEYFNAVLINEVDEEGNNVELGGEFVLEPNEHFNNLSVNLSLSVVQVPTNMYNKDPAIVN
GVYWSEALNKVFVDNFEKDPSLIWQYFGSAKGFFRQYPGVKWHPDEHGVIAFDCRNRKWY
IQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNQEIHYVEPC
LNGTLVRADRNNKAHFREHLDKLFAKGIGLLGDALTEAFTILNDFNQTGHGSVCSQAIML
VTDGATQMYDDVFAKFNWPDRKVRIFPYLIGRESAFADNMKWMACANKGYFSQISTLADV
QENVMRYLHVMSRPKVIDHEHDTVWTEAYMDSTGSIILSQAHKSRNKKGPSLMTTVAMPV
FSTKNETKNQGILLGVVGTDIPLQELMKIIPKHLLGIHGYAFAITNNGYILTHPDLRPLY
QKGQKRRKPNYSSVDLSEVEWEDKDDFLRNAMVNRKTGTFSMEVKKTVDKGKRLLKMHND
YYYTEVKGTPFSVGVALSRGHGKFFFRGNVSVEAGLHDLEQPDVALADEWTYCNTDEHYE
HRSLSQIQAIKLYLTGRKPLIKCDRELIQEVLFDAVVTAPLEAYWTGLALNKSENSDKGV
EIAYLGTRTGLSRTNLFVVQEDLSNQDFLTAEDKEXVFNADHFPLWYRESAEQVPGTFVY
STRFSSGNENKSVVLASTAIQLLDDRKSPIVASVGIQMNLDFFQRKFWTASRQCAALDGK
CSISCDNEDIKCYLIDNNGFILVTEDYSQTGEFFGEVEAAVMTKLLLIGSFKRINLYDYQ
ALCREYAGSSDSGHCLSHPFSIVKWILTELVIFLLEFNLYSWWHVDLSVKGQYVQNSRER
PCWCHVDTEYPAFVSERTIKETTGNIDCEGCVRSFVIQQIPSSNLFMVVVDNKCDCSSTL
PVSMDPIEIMYNESLKCDRLKFQKDRKRPESCHPFHPEENAMECGGAAGLSAPLTAALLP
LLATLFTR
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtgaagatgctgtggaattggaagatcctcgtttcgcacgtgtgctgcgccagc
ttacttctgttctggattatactgggaacggcagtggtggacgtgatagggtcccagcaa
gggattcctctctcagtggtgaagttatgggcctcagcgtttggtggagaaattaaatca
atttctgcaaaatactctggatcccagctgctgcagaagaaatataaagaattggaaaag
tctgtccgagtggaagaaattgatggcatgaaagtggtcaaaaatctatcgaagaagatg
gaggacatgttccggaagaaaaaggaggcaattcggaggctggtggaggcagcagaggag
gcacatctacagcacgcaggaaaacccagagctacagtagacaaagataaatggaactct
tatgcacagtgcattgttccacttttcttcctgaagattggaaactcactcgggcaacaa
atcacttgtggccacccagttaatagctggacttacatcatatatgagtacttcaacgcg
tatgagtacttcaacgcggtgctgatcaacgaggtggatgaggagggcaacaacgtggag
ctgggaggagagtttgtcctcgaacccaatgaacacttcaacaacctgtcagtcaacctc
agcctcagtgtggtgcaggtgcccaccaacatgtataacaaagatcctgccatagtgaat
ggggtgtattggtcagaggccttgaataaagtgtttgtggataactttgaaaaagatccg
tccctgatatggcagtactttggcagtgccaagggcttctttaggcagtatcccggggtc
aaatggcatccagacgaacacggggtcatcgcctttgactgcaggaacaggaaatggtac
atccaggcagcgacatctcctaaagacgtggtgattctagtagacgtgagtggcagtatg
aagggcctgagactgaccatcgccagacagactgtctcctctatactggacacactggga
gacgacgacttcttcaacatcatcgcttacaatcaagagattcactatgtggagccttgt
ctgaatggtacactggtacgagcagacagaaacaataaagctcattttagagaacatctg
gacaagctgtttgccaaagggattggtctgctgggtgatgckcttaccgaagcattcacc
attctaaatgattttaaccagactgggcatggcagtgtgtgtagccaggccatcatgctt
gtgactgacggggccacacagatgtacgacgatgttttcgccaagttcaactggccagac
agaaaggtgcgcatattcccttacctgattggccgagagtctgcctttgctgataacatg
aaatggatggcctgtgctaataaagggtatttcagtcagatctccacactggctgatgta
caggaaaatgtgatgaggtatcttcatgttatgagtcgtcctaaagtcatcgaccacgag
catgacacggtctggacagaggcctacatggacagcactgggagtatcatactctcccag
gcacacaagtccagaaacaagaagggccccagcctgatgaccactgtggccatgcctgtg
ttcagcaccaagaacgagacgaagaaccagggtattctcctaggggtagtgggcacagac
attcccctacaggaactcatgaagatcatccctaaacacctgctgggtatccacggttac
gcgtttgccatcactaacaacggctacatcctgacccatccagacctgaggccactgtac
cagaagggccagaagaggaggaaacccaactatagcagtgtggacctgtctgaggtggag
tgggaggacaaggatgactttctgcgtaatgccatggtcaacaggaagactgggactttc
tccatggaagtgaagaagacagtggacaaagggaaacgtctcctgaagatgcacaatgac
tactactacactgaagtcaagggaactcccttcagtgtcggtgtggctttgtccagaggc
catggcaaattcttcttcagaggaaacgtctccgtagaagcagggcttcatgacctggaa
cagccagatgttgcgctggcagacgaatggacgtactgcaacacagacgagcactatgag
caccgttctctctcccagatccaggctattaaactctacctgaccggacgcaaaccactc
atcaaatgtgacagggagctgatccaggaggttctgtttgatgctgtggtcacagcccca
ctggaggcctactggacaggcctggccctcaacaagtcagaaaattcagataaaggtgtg
gagattgcttacctgggcacacgcactggcctctctagaaccaacctgtttgttgtccaa
gaggatctatccaatcaagacttcctgacagcggaggataaggagngggtgtttaacgct
gaccacttccccctgtggtatagagagagcgcagagcaggtccctggcacatttgtctac
tccacccgtttctcctcaggaaatgagaataagagtgtggttttggccagcaccgccata
cagctgctggatgacaggaagtcacccattgttgcatccgttgggattcaaatgaacttg
gatttctttcagaggaagttctggaccgctagcagacagtgtgctgctctggatgggaag
tgcagcatcagctgtgataatgaggacatcaagtgttacctcatagacaacaacggcttt
attctggtcacagaagactactctcagacgggggagttctttggcgaggtggaggctgct
gttatgaccaagctgctcctcattggctccttcaagaggatcaatctgtatgactaccag
gctctctgtagagagtatgctggcagcagtgacagtggacactgtttatcacatcccttc
tccattgtgaaatggatcctgactgaactagtaattttcctcctggaattcaacttgtac
agctggtggcatgttgacctctctgtcaaaggtcagtatgtccaaaactcgagggaaaga
ccatgttggtgccatgtggatactgagtaccctgcctttgtctctgagcgtaccatcaaa
gagaccacgggcaacattgactgtgagggctgtgtcagatcttttgttattcagcagatt
cccagtagtaacctcttcatggttgtcgtggacaacaagtgtgactgtagctccaccctt
ccagtttccatggaccccattgagattatgtacaacgaatctctgaaatgtgataggctg
aagtttcagaaggacaggaagcggccagaatcatgtcatcctttccaccctgaggagaat
gccatggagtgtggaggagcagcaggcctgtctgcccccctcacagcagcactgctcccc
ctgctggccactctcttcaccagatga
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