Salvelinus sp. IW2-2015 (Arctic char): 111970892
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Entry
111970892 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111970892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111970892
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111970892
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111970892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
PRY
zf-C3HC4_2
zf-C3HC4_3
Ig_DSCAM-DSCAML_C
zf-RING_2
Pur_ac_phosph_N
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
111970892
NCBI-ProteinID:
XP_023853405
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MDALESELTCPICLELFEDPLLLPCAHSLCFGCAHRILVSHCASNEPVQSIGAFQCPTCR
YVISLSPQRGLEGLKRNVTLQNIIDRVQRATSSGPLALLPHSGPNSPSEKAGRFALALVP
ASTAMTSPGTPPSHVQCQFCEQDPPQNAVKTCVTCEVSYCDECLRATHPNKKPFTGHRLI
EPMPDCHLRGLQCLEHEEEKVNMYCVTDEQLICSLCKLVGRHRDHQVAALSDRFEKLKQA
LDSNLSHLVKRNNELEGLMGKLIQTCQNVEVNASRQEGKLMEECDLLIDIIQQRRQIIGT
KIKEGKAVRIRKLAQQISNCKQCIERSSALITQADQTLKETDHARFLQTAKSITERVSMA
TASSQVLIPEINLTDTFDTFALDFTKEKKLLESLDYLTAPSPPGIREELCTASYDTITVH
WTSDDEFTVLSYELQYAIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFI
VKAINQAGARSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETASKKGHGQERF
TSQSSYGVVGNVYIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNSASWVLCRCNN
SWVVRHNSKELAIEPSPHLRRVGVLLDYDAGSLTFYDAVGSQHLHTFHVSFAQPVCPVFN
VWNKCLTVLTGLPIPEHLEGLETQD
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgctggagtcagagctgacttgcccaatctgcctcgagctctttgaggaccca
ctgctcctgccctgtgcccacagcctgtgcttcggctgcgcccatcgcatcctggtatcc
cactgcgcctccaacgagcccgtccagtccatcggagccttccagtgccccacctgccgc
tatgtcatctctctcagtccgcagcgtggcctagaaggactgaaacgcaacgtcaccctc
cagaacatcatcgaccgcgtccagagggccacctcctccggccccctggccctgctgcct
cacagcgggcccaactcccctagcgagaaggccgggcgattcgccctggccctggtcccc
gcctccaccgccatgaccagccccgggacgccgcccagccacgtgcagtgccagttctgc
gagcaggacccgccgcagaacgccgtcaagacgtgcgtgacatgcgaggtgtcatactgc
gacgagtgcctgcgcgccacgcaccccaacaagaagcccttcacgggccaccgtctgatt
gagcccatgccggactgccacctgcgggggctgcagtgcctggagcacgaggaggagaaa
gtgaacatgtattgcgtcaccgacgaacagctcatctgctcgctgtgcaaactggtggga
agacaccgagaccaccaggtggcggccttgagcgaccgcttcgagaaactcaagcaagcg
ttggattccaacctgagtcatttggtcaagaggaacaatgagttggaggggttgatggga
aagttgatccaaacctgtcaaaatgtagaggtcaatgcatcacggcaggagggaaagctg
atggaagaatgcgacctcctgattgatatcatccagcaaaggagacagatcattgggacc
aaaatcaaggagggaaaggcagtacggatcaggaagctagcccagcagatctccaactgt
aagcagtgcatcgagaggtcctctgccctcatcacccaggccgatcaaaccctgaaggag
acggaccatgcccgattcctccagaccgccaagagtatcaccgaaagggtttccatggcg
accgcctcctctcaggtcctgattccagagatcaacctgactgacacgtttgacacgttc
gctctggacttcaccaaggagaagaagctgctggagagcctggactacctcacagcgcca
agtcctccgggcatcagagaagagctctgcactgcatcgtacgacaccatcaccgtccat
tggacctcagacgacgagttcacagtgctttcctatgagcttcagtatgctatcttcaca
gggcaagccaacgttgtcagcctgtgtaactcagcagacagctggatgattgtgcctaac
atcaagcagaaccactacaccgtccacggcctgcagagtggcaccaagtacatcttcatc
gtcaaagccatcaaccaggcaggtgcccgcagcagtgagccagggacactcaaaaccaac
agccaaccattcaagctggaccccaagtccgcccacaagaagctgaaggtctcccatgac
aacctgacggtggagcgcgacgagacggcatcgaagaagggacacggccaagagcgcttc
accagccagagtagctacggagtcgtcggcaacgtttacatcgacagcggacgccactac
tgggaggccctgattggaggaagcacatggtatgcggtgggcatcgcctacaagtcggcc
cccaagcacgagtggatcggcaagaactcggcctcctgggtcctgtgccgctgcaacaac
tcgtgggtggtgcgccacaacagcaaggagctggccatcgagccttcgccccacctgcgc
cgcgtgggcgtcctgctggactacgacgccggctcgcttaccttctacgacgccgtgggc
tcgcagcacctgcacacgttccacgtgtccttcgcccagcccgtgtgccctgtcttcaac
gtatggaacaagtgtctgactgttctcacgggtctgcccatccctgaacacctagaaggg
ttggaaacccaggactga
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