Salvelinus sp. IW2-2015 (Arctic char): 111970901
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Entry
111970901 CDS
T05762
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04080
Neuroactive ligand-receptor interaction
salp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111970901
04082 Neuroactive ligand signaling
111970901
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111970901
Ion channels [BR:
salp04040
]
Ligand-gated channels
GABA-A
111970901
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
111970901
NCBI-ProteinID:
XP_023853415
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Position
LG12:3984370..4019207
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AA seq
470 aa
AA seq
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MMALSTDIEDKIPSFSTMKHVWISVLLLCMTCQVGLGQTTAEALKEAEANDNITIFTRIL
DGLLDGYDNRLRPGLGEKVTEIKTNICHKALASSDTEMEYTIDVFFRQSWKDERLCFKGP
MEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAECP
MQLEDFPMDAHACPLKFGSYAYPVSEVVYLWQTGAAKSVVVAEDGSRLNQYHLIGQTAGS
EDIYTSRGQYTVMMCHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGV
TTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGK
KAMEAQHPKKRDPMVLSKKPNNVCTAGVNYTPNITKDISISTISNSTSIQLRSSETEVLD
PKKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGVNILAPT
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgatggctctctctacagacatagaggacaaaatmcccagcttttctacaatgaaacac
gtgtggatctctgtcttgctgctttgtatgacatgtcaagtgggtcttggccagaccaca
gcagaggcattgaaagaggcggaggctaatgacaacatcaccatcttcacacggatactg
gacggactgctggacggctacgacaacagactcagaccaggacttggagaaaaggtcacg
gagatcaaaacaaatatttgtcacaaggctttggccagttcagatactgaaatggaatac
accattgatgtgtttttccgacaaagctggaaagatgagcgcctgtgtttcaaaggaccc
atggagatgctgcctcttaacaacctcctggccagtaacatctggaccccagacacattc
ttcctcaacgggaaaaagtctatcgcccacaacatgaccacacccaacaagctactgaga
ctgaaggatgacgggacgctgctctacactatgaggttaaccatatcggcagagtgtccc
atgcagttggaggacttcccaatggatgctcatgcttgccctttgaagtttggaagctat
gcctatccagtctctgaggtggtgtacctctggcaaactggtgctgccaagtctgtagtg
gtggcagaagacggatcccgtctcaaccagtaccacctgattggccagaccgcaggctct
gaggacatctacaccagtcgaggacagtacaccgtcatgatgtgtcacttctacctgaag
aggaagattggttactttgtcattcagacctacatgccctgcttcatgaccgtgatcctg
tcccaggtgtccttctggctcaaccgtgaatctgtaccagccaggaccgtttttggtgtc
actacagtgctgactatgactactctcagtatcagcgctcgcaactcgctgcctaaggtg
gcctacgccacagccatggattggttcatcgctgtgtgctatgcgttcgtcttctccgcg
cttatcgagtttgccaccgtcaactatttcaccaagaggagctgggcgtgggatggcaag
aaggccatggaggctcagcacccaaagaaaagggaccctatggtgctttctaagaagccc
aacaacgtctgtacagcaggagtgaactacacccccaacatcactaaggatatctctatc
tccaccatctccaacagcacctccatacaactaagatcytctgaaacagaagtkctggac
cccaagaaaacctacaacagcgtgagcaaaatcgacaaaatgtcccggatagttttccct
gtcctatttggaacctttaacctkgtgtactgggctacttacctcaacagagaaccggtc
atcaaaggagtcaacatattggctccaacatag
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