Salvelinus sp. IW2-2015 (Arctic char): 111970988
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Entry
111970988 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: methionine--tRNA ligase, cytoplasmic
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00450
Selenocompound metabolism
salp00970
Aminoacyl-tRNA biosynthesis
salp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
111970988
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111970988
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
salp01007
]
111970988
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
salp03016
]
111970988
Enzymes [BR:
salp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
111970988
Amino acid related enzymes [BR:
salp01007
]
Aminoacyl-tRNA synthetase
Class I (U)
111970988
Transfer RNA biogenesis [BR:
salp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
111970988
Prokaryotic type
Other AARSs
111970988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
Anticodon_1
tRNA-synt_1e
GST_N_3
DZR_2
Motif
Other DBs
NCBI-GeneID:
111970988
NCBI-ProteinID:
XP_023853547
LinkDB
All DBs
Position
LG12:8017690..8062390
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AA seq
959 aa
AA seq
DB search
MKLFVSDGNPHCVKVLAVLGFTGVKCDVKHVNHEERVVPYLTXPALPALLLPSGTYLFXP
NSICQYLIEVNGQESSDIVNQWLEWEATELQPAVMQALHMVVLQGKEXRTTRVLQGPLSY
LDQGLSKRTTLFLTAEKVSVADVVCXGALYPILSDSSLVSGSNQTLQHWFERVGMLAACG
SAAQTALYGKGLKAESLKTYLQRQPATHQGQGQGRGTQPCNSPEGDDDGDCVLSEEEIQS
AAVTWGKGLADLPMVPERQHPILPKEGKRNVLVTSALPYVNNVPHLGNIIGCVLSADVFA
RYGRLRGWNVLYVCGTDEYGTATENKAREEGLTAQQICDKYHAVHASIYQWFQVDFDFFG
RTTTKKQTEIAQNIFWRLHERGFLLEDIVEQLRCEACQRFLADRFVEGTCPFCSYPEARG
DQCDKCGKLINAVELREPTCKVCSQTPVVQSSKHLFLDLPKLEPELEQWLERSTGSGDWT
ANAKQITRSWVRDGLKPRCITRDLKWGTPVPHPDFSDKVFYVWFDAPIGYLSITANYTDQ
WEKWWKNPQQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNHLVATEYLNYEDTKFS
KSRGVGVFGDMAKDTGIPSDVWRFYLLYLRPEGQDSAFSWVDMATKNNSELLNNLGNFIN
RAGMFVSKFFENCVPAMALQQEDKRLLAQVGWELKQYINLMDRVKIRDALKCILNISRHG
NQYIQVNEPWKKIKGDETDRQRSGTVTGVSVNVACLLSVMLQPYMPTVSQTIRQQLNAPP
TVTGTMLQGTGNFVCSLPAGHHIGTVSPLFQKLESDQIESLKKRFGGQQPKTTAQTDVNA
QPAPTPASDPAAQTAVNGADAERARDLTLAVAEQGEKVRTLKGQKAEKAVIGAEVTKLLE
LKKQLSLAEGKHPEPVLTKGKKSAQPAPTPASDPAAQTAVNGADAERARDLTLAVAEQG
NT seq
2879 nt
NT seq
+upstream
nt +downstream
nt
atgaaactattcgtgagtgacggaaatccgcactgtgttaaggtgctagcagtgctcgga
tttactggagtcaaatgtgacgttaaacatgtcaaccacgaagagagagtggtaccctac
ctcaccngtccagccctgcctgccctgctcctccccagtggaacatacctcttcnaccca
aactcaatctgccaatacctgatagaggtgaatggacaggaatccagtgatatcgtcaac
cagtggctggaatgggaagctacagaactacagcctgcagtgatgcaggcccttcacatg
gtggtgctgcagggaaaggagnncagaaccaccagggttctacagggacctctcagctac
ctggaccagggcctgagcaagaggaccacgctgttcctcactgctgagaaggtttcagtg
gcagacgtggtctgtnngggagctctctaccccatcctgtctgacagcagtctggtatca
ggtagtaatcagacgctgcagcactggtttgaacgtgtgggcatgttggcagcctgtggg
tctgcagcccagactgcactgtacgggaagggactgaaggctgagtctctgaagacctac
ctgcagagacagccagccacacaccagggacagggacagggtagaggcacacagccatgc
aacagccctgagggtgatgatgatggtgattgtgtgctgtcagaggaagagattcagtct
gccgcggtcacctggggtaaaggacttgcagacttacccatggttccagagagacaacac
cctattcttcctaaggagggcaagaggaacgtcctcgtgaccagtgccttgccttatgtt
aacaacgtccctcatctgggcaacatcatcggctgtgtgctcagcgctgacgtcttcgcc
aggtacgggcgtctgcgtggttggaatgtactgtatgtgtgtgggactgatgagtacggt
acagctacagagaacaaggcccgtgaggaaggtctaacagcgcagcagatctgtgacaag
taccatgctgtccacgcctccatctaccagtggttccaggtcgactttgacttctttggc
cgcaccaccacaaagaaacagacggagatagcccagaacatcttctggcgtctccatgag
cgaggcttcctacttgaagacattgtggagcagctgcgctgcgaggcgtgccagcgtttt
ctagccgaccgcttcgtggagggaacatgtcccttctgctcttacccagaggcccgaggg
gaccagtgtgacaagtgtggcaagcttatcaacgctgtggagctacgggagcctacttgt
aaggtgtgcagtcagactcctgtagtccagtcctccaaacatctgttcctggacctgccc
aagttggagcctgagttggagcagtggttggagaggtctactgggtcaggggactggacg
gccaacgccaaacagatcaccagatcctgggtgagggacggactcaaaccccgctgcatc
accagagacctgaagtggggaacccctgtacctcaccccgacttctctgacaaggtgttc
tacgtgtggtttgacgctcctattggttacctgtccatcacagccaactacactgaccaa
tgggagaagtggtggaagaacccacagcaggtggagctctataacttcatggccaaggac
aacgttccgttccacagtgtggtgttcccctgctctctactgggagcacaggacaactat
acactggtcaaccacctggtggctacagagtacctgaactacgaggacaccaagttctct
aagagtcgaggtgttggtgtgtttggtgacatggccaaggatacgggcatcccctctgac
gtgtggcgattctacctgctctacctccgtcccgagggacaggactcggccttctcctgg
gtcgacatggccaccaagaataactctgagttgctcaataacctgggcaacttcatcaac
agggctggtatgtttgtcagtaagttctttgagaactgtgtacctgccatggctcttcag
caggaggacaagagactgttggctcaggtgggatgggagctgaagcagtacattaacctc
atggacagagtcaagatccgtgatgccctgaagtgtatcctcaacatctctcgccacggt
aaccagtacatccaggtcaacgaaccctggaagaaaatcaaaggagacgaaacagacagg
cagcgatcggggacagtgacaggtgtgtctgtgaatgtggcgtgtctgctgtccgtcatg
ctccagccctacatgccaacggtcagtcagaccatccgccagcagctgaacgccccgccc
accgttaccggcaccatgctgcagggcacagggaacttcgtctgctctctgcccgccggg
catcacattggcacggtcagcccgttgttccagaaactagagtccgaccagatcgagtct
ctgaagaagaggtttggaggacagcagccaaagacgacagcccagactgatgtcaacgct
cagcccgccccaaccccagcttcagatcctgctgctcagactgcagtgaacggtgcagac
gcagagagagccagggacttaacactggctgtggcagaacagggggagaaggtccggacc
ctgaagggccagaaggcagagaaagctgtgattggagcagaggtcaccaaactcctggaa
ctgaagaaacagctatccctggctgagggaaagcacccagaaccagtgctgacaaaaggc
aagaagagcgcccagcccgccccgaccccagcttcagatcctgctgctcagactgcagtg
aacggtgcagacgcagagagagccagggacttaacactggctgtggcagaacaggggga
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