Salvelinus sp. IW2-2015 (Arctic char): 111971089
Help
Entry
111971089 CDS
T05762
Name
(RefSeq) nck-associated protein 1 isoform X1
KO
K05750
NCK-associated protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04810
Regulation of actin cytoskeleton
salp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
111971089
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111971089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nckap1
Motif
Other DBs
NCBI-GeneID:
111971089
NCBI-ProteinID:
XP_023853654
LinkDB
All DBs
Position
LG12:13257161..13319142
Genome browser
AA seq
1137 aa
AA seq
DB search
MSRGVMQPSQQKLAEKFTILNDRGIGMLTRVYNIKKACGDPKAKPSYLVDKNLESVVKFI
VRKFPAIETRNNNQQLAQLQKEKSEILKNLSLYYFTFVDVMEFKDNVSELLNTIDACQVF
FDVTVNFDLTKNYLDLVVTYTTLMMLLSRIEERKAIIGLYNYAHEMTHGASDREYPRLGQ
MIVDYENPLKKMMEEFVPHGKSLSDALISLQMVYPRRNLSADQWRNAQLLSLISAPSTML
NPAQSDTMPCEYLSLDCMEKWIVFGFVLCHAVLNTDPAALSLWKLALQSSTCLCLFRDEV
FHIHKSCEDLFVNIRGIIPKSSVPSYNKRLNDIKECKEQALSQAGSMHRERRKYLRSALK
ELATVLSDQPGLLGPKALFVFMALSFARDEIIWLLRHADNIQKKSTDDFIDKHVAELIFY
MEELRAHIRKYGPVMQRYYVQYLSGFDAVILNELVQNLSVCPEDESIIMSSFVNTMTSLS
VKQVEDGDVFDFRGMRLDWFRLQAYTSVSKASLGIADHRELGKMMNTITFHTKMVDSLVE
MLAETSDISIFCFYSRAFEKMFQQCLELPSQSRHSISFPLLCTHFMSCTHELCPEERHHI
GDRSLSLCNMFLDEMAKQARNLITDICTEQCMLSDQLLPKHCAKTISQAVNKKSKKLTGK
KGEPEREKPGVESMRKNRLLVTNLDKLHTALSELCFSINYVPNIVVWEHTFTPREYLTSH
LEIRFTKSIVGMTMYNQATQEIAKPSELLTSVRSYMTVLQSIENYVQIDITRVFNNVLLQ
QTQHLDSHGEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYS
DISEMRSLSELLGPYGMKFLSESLMWHISSQVAELKKLVVDNMEVLNQMRTSFDKPEQMA
ALFKKLSSVDSVLKRMTIIGVILSFRSLAQEALRDVLSFHIPFLVSSVEDFKDHIPRETD
MKVAMNVYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSMPTLA
SNVMSQYSPAIEGHCNNIHCLAKAVNQIAAALFTIHKGSIEDRLKEFLALASSSLLKIGQ
ETDKMTTRNRESVYLLLDMIVQESPFLTMDLLESCFPYVLLRNAYHAVYKQSISSSA
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggggggtaatgcagccgagccagcagaagctggcagagaaatttaccatcctt
aacgacaggggaatcgggatgctcacccgggtctataacatcaaaaaggcatgcggggac
cccaaagcaaagccgtcatacctggtagacaaaaacttggagtckgtggttaagtttatc
gtacgaaaattccctgcaatagagacacgaaacaataatcaacagcttgcacagcttcaa
aaagaaaagtctgaaatactaaagaatctatctctatattacttcacatttgtggatgtc
atggaattcaaggacaatgtttctgaattgctgaacactattgacgcttgccaggttttc
tttgatgttacggttaactttgacctcaccaagaactaccttgacttagttgtcacctac
actacactaatgatgctactgtcccgtattgaagagcggaaagcaatcattggactctac
aactatgcccatgaaatgacccacggggccagtgacagggaatacccaaggctgggccaa
atgatcgtggactatgagaatcctctgaaaaagatgatggaagagtttgtccctcatggg
aagtctttgtcagacgcactcatctcgctgcagatggtctaccccaggaggaacctgtct
gcagaccagtggaggaacgcccagcttctgagcctgattagcgcccccagtaccatgctc
aacccagcccagtcagacacaatgccctgtgaatacctctccttagactgtatggagaaa
tggattgtgttcgggttcgtcctgtgccacgcggtgctgaatactgacccagcagcgctg
agcctgtggaagctggccctccagagcagcacctgcctctgtctcttcagggatgaggtc
tttcacattcacaagtcctgtgaggacctgtttgtcaacatccgtggtatcattccaaag
tcatctgtaccaagctacaataaacgtctaaatgacatcaaagaatgcaaagaacaagca
ctatcgcaagctggatccatgcatagagaaaggcgcaagtatcttaggtctgccctgaaa
gagttggccacagttctgtctgaccagcctggactgctgggcccaaaggctctgtttgtg
ttcatggctctctctttcgcacgagacgagatcatctggctcctccgccatgcagacaac
atacagaagaaaagcacagatgacttcattgacaagcatgttgcagagctcatcttctac
atggaggagctccgggcacacatcaggaagtacggtcccgtaatgcaacggtactatgtg
cagtacttgtccggctttgacgctgtgattctcaacgagcttgtgcagaacctctccgtc
tgccctgaggacgagtccatcatcatgtcctcctttgtgaacaccatgacctccctcagc
gtgaagcaagtggaggacggagacgtgtttgatttccggggcatgaggcttgactggttc
cgtctacaggcctacactagtgtgtcaaaagcctctctgggcatcgctgaccaccgtgaa
ctgggcaagatgatgaacaccatcacattccacaccaagatggtggactccctggtggag
atgttggcggaaacctcagacatctccatcttctgcttctacagccgagcatttgagaag
atgtttcagcagtgtttggaactgccctcacagtcgcgccactctatctcattccccctg
ctgtgcacacacttcatgagctgcacccacgagctctgtcccgaagagcggcatcacatt
ggcgaccgcagtctgtcgctctgcaacatgttcctggacgagatggccaagcaggcgcgc
aacctcatcaccgacatctgcacagagcagtgcatgctcagtgaccagctgctccctaaa
cactgtgcgaaaaccatcagtcaggcagtgaacaagaagtccaaaaagctgactgggaag
aaaggcgagccggagcgagagaagccgggtgttgagagcatgaggaagaacaggctcctg
gtcaccaacctggacaagctgcacacggcgctgtcagagctgtgcttctccattaactac
gtgcccaacattgtggtgtgggaacacacctttaccccccgcgaatacctcacctcccac
ctggagatccgcttcaccaagtccattgtggggatgaccatgtacaaccaggccacgcaa
gagatcgccaagccctccgagctgctcaccagcgtgcgttcctacatgacagtgctgcag
tccatcgagaactatgtgcagattgacatcacgcgggtgttcaacaatgtgctgctgcag
cagacccagcacctggacagccatggggagcccaccatcaccagcctctacaccaactgg
tatctggagaccttgctccggcaggtaagcaacggccacattgcctacttcccggccatg
aaggcctttgtcaacctgcctacggagaacgagctcacctttaatgctgaggagtactca
gatatatccgagatgaggtcactgtcagagctgctgggaccctatggcatgaagttcctc
agcgagagcctcatgtggcacatatcctcccaggtggcagaactcaagaaactggtggtg
gacaacatggaggttctgaaccagatgaggaccagctttgataagccagagcagatggct
gccctctttaagaagctctcatctgttgacagcgtcctgaagaggatgaccatcattgga
gtcatcttgtcattccgatcactggcccaggaagcactccgcgacgtgctgtccttccac
attcctttcctggtgagctccgtcgaggatttcaaggaccacattcccagagagactgac
atgaaggtggccatgaatgtgtatgagctgtcgtctgcagcaggcctgccctgtgagata
gacccagccttagtggtggccctttcttcacagaaatcagaaaacataagcccagaggag
gagtataagatcgcctgtctgctcatggtcttcgttgccgtttccatgccaactctggcc
agcaacgtcatgtctcaatatagccctgcaatcgaaggacactgcaacaatattcactgt
ctggcgaaagctgtcaaccagatagctgctgccttgttcaccattcacaagggaagcatt
gaagatcgtctcaaagaatttctggctctggcgtcttccagcttgctgaagatcggccag
gagactgacaaaatgacgacacgaaacagggagtctgtgtacctgctgctggacatgatt
gtccaagagtctccattcctcaccatggacctcctggagtcatgcttcccctacgtgtta
ctgagaaacgcgtaccacgccgtctacaagcagagcatcagctcctctgcataa
DBGET
integrated database retrieval system
