Salvelinus sp. IW2-2015 (Arctic char): 111971232
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Entry
111971232 CDS
T05762
Name
(RefSeq) putative tyrosine-protein phosphatase auxilin
KO
K09526
DnaJ homolog subfamily C member 6
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111971232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
salp03041
]
111971232
03110 Chaperones and folding catalysts [BR:
salp03110
]
111971232
04131 Membrane trafficking [BR:
salp04131
]
111971232
Spliceosome [BR:
salp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111971232
Chaperones and folding catalysts [BR:
salp03110
]
Heat shock proteins
HSP40 / DNAJ
111971232
Membrane trafficking [BR:
salp04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
111971232
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PTEN_C2
DnaJ
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
111971232
NCBI-ProteinID:
XP_023853780
LinkDB
All DBs
Position
LG13:complement(33316136..33407420)
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AA seq
987 aa
AA seq
DB search
MSLLGGYKKKTCSYDGYESLQLVDSSGNFNNGGGRGSGIGGGSVAATLGGPKAGPLREDD
CSTMDSSGPPSPDMDANYGGGLLDMVKGGAGKFFSNFKDNLKDTLKDTSTKVMHQVATYT
KGELDIAYITSRIIVMSYPAEALQIGNQNHVEDIRSFLDSRHADHYTVFNLSQRNYRGAK
FSNRVSECNWPSRQAPSLHNLFAVCKNMHNWLKQNPKNVCVITCSDGRAPSGVLVCAMFC
FCHLFSNPVPAMQLLSAKRPGSGLWPSHRRYIGYVCSMVSEKPSLPHSKPLVVKAVTMSP
VPCFNKQRIGCRPFCEVLIGETKIFSTAQDYERMREHRVQDGKVVFPLGVNVQGDVVISV
YHMRNTIGGRLQAKVSNTQILQIQFHTGFIAPGTTVLKFTKPELDACDSPEKYPQLFHVL
VDIEVEGTDKQKDLTPPWEQFPNKDLIPNVLFSCHQEHQDALAIAEPSRSHSGSDGRPHG
EDSEPSDDEMLSLSSQQSNASGERHGGAQAGPRGPKRPEQPQAHATAPPPPEEMDLLGLD
GAAVNPPCPKPQPPTTNTTTDLLGDLFGASPAPAWKWARLGPVHPPENSPSLHLSLPLPT
FDPFGAGPMPKPQELMGSFRGPAGNLGNRGLPAPLLHAARSPSPTMQNTGKGRSSPVPPT
TPVVTIQQPPNAMGGWDWNKSAAPGGGFSMGSKSASTSPTGSVHSTPTHQAKPKTLDPFA
DIGNLGGSLGGGSGFSSKPTTPTGTTPAFPPTGSPSRPPPSPQHGGGWQANTGFPSWQPG
GGGQAGWQPQPQPQGQGGPPSQAKPSPSHSMPHTSPSNRPNYNISFSAMGGGAAPNAAGK
PQPNMGTKPKVATANFDDLLSGQGFAGAKKKEGPRTIAEMRKEEMAKEMDPEKLKILDWI
EGKERNIRALLSTMHTVLWEGETRWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPY
EQYAKMIFMELNDAWSEFDSQGQKALY
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgagcctactgggtggctataagaaaaagacctgcagttacgatggctatgaatcttta
cagttggtcgatagcagcggtaacttcaataacgggggagggagaggcagcggaatcggc
ggcggctcggtagcagcaaccctaggaggaccgaaggcaggcccactgcgcgaggacgac
tgcagcaccatggacagctcaggtcctccatctccagatatggatgccaactatggcgga
gggctgctggatatggtgaaaggcggagccggcaagttcttcagcaacttcaaggacaac
ctgaaggacacactcaaagacacctccactaaagtcatgcaccaggtggccacgtacaca
aagggagagctggacattgcctacatcacatcacgaatcatagtgatgtcatatcctgcg
gaggcgttgcagatcggcaaccagaaccatgtggaggacatccgctctttcctggactca
cggcacgcagaccactacaccgtcttcaacctgtcacagcgcaactatcgaggcgccaag
ttctccaaccgggtctcggagtgtaactggccgtcccgccaggctccaagcctgcacaat
ctgtttgcggtgtgtaagaacatgcacaactggctcaaacagaaccccaagaatgtgtgt
gtcatcacctgctcggatgggcgtgctccctcgggtgtgctggtctgtgccatgttctgc
ttttgccacctcttcagcaacccagtgcccgccatgcagctactcagcgccaagagaccc
ggctcaggcctctggccctcacaccggaggtacataggctatgtgtgcagtatggtatca
gagaagccctccctgccacactcaaagcccctggtggtcaaggcggtcaccatgagtcca
gtaccctgcttcaacaaacaacgcatcggctgcagacctttctgtgaggtcctcataggg
gagactaagatcttttctacagcacaggactatgagaggatgcgagagcacagggtccag
gatgggaaggtggtcttccctctaggtgtgaatgtccagggtgatgtggtcatctctgtc
tatcatatgaggaacaccataggaggacgactgcaggccaaggtgtccaacactcagata
ctccagatccagttccacacaggcttcatcgctccagggacaaccgtgttaaagtttaca
aagccggagctggatgcgtgtgactctccagagaagtacccccaactgttccatgtgctg
gtggacattgaggtggagggtacagacaagcagaaggacctgacccctccctgggaacag
ttccctaataaagacctgatccccaacgtgctgttctcatgtcaccaagagcaccaggac
gccctcgccatcgcagagccgagccggtcccacagtggttcagatggtcgccctcacggg
gaggacagtgagccgtctgatgatgaaatgctgtccctgtccagccagcagagcaacgct
agcggagagagacacggaggggcccaggctggccccaggggccccaagagaccagagcag
cctcaggcccacgccactgctcctcctccmccagaagagatggacctcctgggcctggat
ggggctgctgtgaaccccccctgccccaaaccccagccccccaccaccaacaccaccacg
gacctcctgggggatctgtttggagcctccccagcccccgcctggaagtgggcccgcctc
ggcccagtccaccccccagaaaatagcccctccctccacctctccttgcccctccccacg
ttcgacccatttggggcgggtccgatgcccaagccccaggagctgatgggttccttccgg
ggtccagcaggtaaccttggtaaccgggggctgcctgcccccctcctgcatgcagctcgy
tctccgtcccccactatgcagaacactggcaagggacggagctccccagtcccgcccacc
acccctgtggtcaccattcagcagcctcccaacgccatgggaggatgggactggaacaag
tctgcagctccaggaggggggttcagtatgggcagtaagtcagccagtaccagtcctacc
gggtcagtccacagcacccccacacaccaggccaaacccaagaccctggaccccttcgct
gatattggaaacctggggggcagtctgggaggaggctctggcttctccagtaagcctacc
acccctacaggcaccacccctgccttcccacccacgggctccccctcacggcctcctccc
tcgccccagcacggtgggggctggcaggctaacacaggcttcccctcctggcagcccggt
ggtggagggcaggcagggtggcagccccagccccaaccccagggtcagggtggcccgccc
tcccaggccaaacccagccccagccactccatgccgcacacctccccctccaacagaccc
aactacaacatcagcttctctgccatgggaggaggggctgctcccaatgcagccgggaaa
ccacagcccaacatgggtaccaagcccaaagttgcaacggctaacttcgatgacctgctg
tctggccaaggctttgctggagccaaaaagaaggaaggtcccaggacaatagcagagatg
aggaaggaggagatggctaaagagatggaccccgagaaactcaagattctggattggatc
gagggcaaggagcgtaacatccgggccttgctgtccaccatgcacacggtgctctgggag
ggggagacccgctggaagcctgtaggcatggctgacctggtgaccccagagcaggtcaag
aaggtttaccgcaaagccgtgctggtggtccatccagacaaggccacgggacagccctat
gaacaatatgccaagatgatttttatggagctgaatgacgcctggtcagaatttgacagc
caaggacaaaaagcactctactga
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