Salvelinus sp. IW2-2015 (Arctic char): 111971431
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Entry
111971431 CDS
T05762
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111971431
Membrane trafficking [BR:
salp04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
111971431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
DUF5119
Motif
Other DBs
NCBI-GeneID:
111971431
NCBI-ProteinID:
XP_023853973
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All DBs
Position
LG13:38939457..38963717
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AA seq
1049 aa
AA seq
DB search
MVHVYNCHPFASQQIVQTEQEPGLVCCGGGVLFVESAGGCKIEAFQLEAEGCPLICRFAT
MGTVQSILHSEIGDYLVTIEEKNNVTYLRTYTNWRYQVAEKTRVGVRLLGHFLRGSSMRG
APKEQMEIIEIPLFERPLCVACCGVTGDLLVGCPKSLVLFSLKRQALNDKLSILDFERCL
ILHLPGLSPQQVAICAGYIALQAELEVLVLKLERLPGSAPTQKSADKKSQDHCLVPKDMI
TGAEHNNEIEMRTEGLAGHLDQDDFFIFPKHQELLGDRAKDCGVKVSLEWTGMESEARGI
LAITYILYRRFAPDFFQGCSVEDTRLHSLQFHPVFTSNQEVCAGGRRGVEPTCVFCFFSL
PNTGYVYSVRGXVEMVSVYQYPEKAQQAVLTDLFLHIITKNALQCFSVRCSAVAARAEDP
YIDTTMKACPPITMEVCALRIQLFIGLKALCHDRHHIVLLTAADVETREDTERAARRNLN
RKSSFTKHRDPIEMSHGWNLYVVNTVPPLQLYNEMVEYSKKYEETNPLSQSCLHLLSEAH
LLLRATLLDPRVGNPVEQPQSSDQNLAQSLGYTATDKIGSTTDRTTDRQELQQAFQESCA
HLGDCFSRFDKRDCHLALPYYKMSGLSVTEVISRNRCLSSSPCGYGKGFLFFLKHSLYEE
TMEELTEETANKVLDIFGVAEPSQLPHVIASPSMVRASPDSGLAHLERLESIGAPSVPLT
LSMAALALRMGDLQLYRQHMDRHTEMLQVYGFIEEHKLLLHGRGHTVVPTPLARHLRDSQ
EGLLVAAMVALHENNKVKLDEADLFFQKLCGNLPGPQGGPQLLVDFWEALLMASSQEAVI
QELLFRLTSVYIDRVTRRDSHGMKPLKTADDLINSCSHYGVPYPWVSILTPAYFSIIQDH
QEDLQKLQSLLCGPTLDVSSILPLLEQLPDGDNAGLSVHLLCATKLDRHESSIERLLDRC
PQAIIPYANHELQNNKMTLWWQKLFPELCERTRAAGGENTILLSALKETLVVVAMELNPL
EFLDLLPDDGTAHFFLPHLLECSQRNLMT
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggttcacgtatacaactgccatcccttcgcttcccagcaaatcgtgcaaaccgaacag
gagcctgggttagtgtgttgtggcgggggtgtcttgtttgtggagtccgcgggaggatgc
aagatcgaggcatttcaactggaagcggaggggtgccctcttatctgccgcttcgccacc
atggggactgtgcagagcatcttgcacagcgagataggggactacctggtgaccatcgag
gagaagaacaatgtcacctacctccgcacctacaccaactggcgctaccaggtggccgag
aagacccgtgtgggtgtgcgtctgctgggccacttcctgcgtggctcatccatgcgtgga
gctcccaaggagcagatggagatcattgagattccgctgtttgagcgcccactgtgtgta
gcgtgctgtggggtgacaggggacctgctggtggggtgtcctaagagcctggtgctgttc
agtctcaagagacaggccctcaacgataagctctccatcctggactttgagcgttgtctg
atcctccacctcccaggactgtcgccccaacaggtggcaatctgtgcggggtacattgcc
ctgcaggcagagctcgaagtgctggtgctcaagctggagagacttcctggctccgcccct
acccagaagtcagctgacaagaagtcccaggaccactgtctagtccccaaggatatgatc
actggagcagaacacaacaatgagatagagatgaggacagagggtcttgctggtcacctt
gatcaggatgacttcttcatattccctaagcaccaggagctgctgggggacagggccaag
gactgtggggtcaaggtctctctggagtggacaggcatggagagtgaggccaggggtatc
ctcgctatcacctatatcttatacagacgttttgctccagacttcttccaaggctgcagt
gtggaggatacccgcctgcactccctgcagttccaccctgtattcaccagtaaccaggaa
gtgtgtgctgggggcaggagaggggtggagccgacgtgtgtgttctgtttcttctcgctg
cccaacacgggctacgtgtacagcgtgaggggcygagtggagatggtctcagtctatcag
tatccagagaaagcccagcaggccgtcctcactgacctcttcctccacatcatcaccaag
aatgctctccagtgtttctcagtgaggtgttctgcagtggcagccagagctgaggaccct
tacatcgataccaccatgaaggcctgtcctcccatcaccatggaggtgtgtgctttgcgg
atccagctgttcattggtctaaaggctctgtgtcatgatcgccaccacatcgtcctgcta
accgctgcagacgtggagaccagggaggacacagagagggctgctcgcaggaacctgaat
aggaagtcatccttcaccaagcaccgggatcccattgagatgagtcacggctggaatcta
tacgtggtcaacaccgtccccccactccaactctacaatgagatggtggagtatagtaag
aagtatgaggagaccaaccctctgtctcagagctgtctgcacctgctcagtgaggcccac
ctcctcctgagagccacgctcctsgacccccgggtgggaaatcccgtggagcagcctcag
agcagtgaccagaacctagcccagtccctgggatatacagcaacagacaaaataggcagc
accactgacagaaccacagacagacaggagctgcagcaggccttccaggagagctgtgcc
catttaggagactgcttcagtaggtttgataagcgtgactgccacctggccctgccctac
tataagatgtcaggcctgtctgtgacwgaggtyatctccaggaacaggtgtctgtccagc
agcccctgtggctatgggaaggggttcctcttcttcctcaaacactcactctatgaggag
accatggaggagctcacggaggagacagccaacaaggtgctggatatcttcggtgtggcc
gagccgtcccagctcccccatgttatagccagcccctccatggtcagagccagtcctgac
agtggcctggcccacctagagcgcctagagtccatcggagccccctctgtacccctcact
ctctccatggctgccctggccctccgcatgggagacctgcagctctacagacaacacatg
gacagacacacagagatgctgcaggtatatgggttcatcgaggagcacaaactgctgctg
catggcagagggcacacggtggtgcccacccccctggcacgccacctcagggacagccag
gaaggtctgctggtagcagccatggtggcgctacacgagaataacaaggtcaaactggac
gaggctgacctcttcttccagaagctttgtgggaacctgccggggccccagggaggccct
cagctgctggttgacttctgggaagccttgctgatggcctcgtcacaggaagctgtcatc
caggagctgctgttccgcctcacctctgtctacattgaccgcgtcacgcgccgagacagc
cacggcatgaaaccactcaagaccgcagacgacctgatcaactcatgttctcactatggt
gtgccgtatccctgggtcagcatcctgactccagcttacttcagtatcattcaagatcac
caggaggacctccagaaactacagtccctgctgtgcggtcccaccctggatgtgtcgtcc
atcctgcccctgttggagcagctgccggacggggacaatgcggggctaagtgtgcacttg
ctctgtgccaccaagctggaccgccacgagagctccatcgagaggcttctggaccgatgt
cctcaggccatcatcccctatgctaaccacgagctgcagaataacaaaatgactctgtgg
tggcagaaactgtttcctgagctgtgtgagagaaccagagcagcagggggagagaacacc
atcttactgtctgcactcaaagaaacgctggtggtggttgccatggagctgaacccactg
gagttcctggacctgttgcctgatgatgggacggcacacttcttcctgcctcacctgctg
gagtgcagccagagaaatctcatgacgtaa
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