Salvelinus sp. IW2-2015 (Arctic char): 111971621
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Entry
111971621 CDS
T05762
Symbol
tlr3
Name
(RefSeq) toll-like receptor 3
KO
K05401
toll-like receptor 3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04217
Necroptosis
salp04620
Toll-like receptor signaling pathway
salp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
111971621 (tlr3)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
111971621 (tlr3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111971621 (tlr3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
salp04054
]
111971621 (tlr3)
04090 CD molecules [BR:
salp04090
]
111971621 (tlr3)
Pattern recognition receptors [BR:
salp04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
111971621 (tlr3)
CD molecules [BR:
salp04090
]
Proteins
111971621 (tlr3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
Tlr3_TMD
LRR_9
TIR_2
TIR
LRR_EndoS
LRR_6
Motif
Other DBs
NCBI-GeneID:
111971621
NCBI-ProteinID:
XP_023854244
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All DBs
Position
LG13:complement(49898863..49904278)
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AA seq
913 aa
AA seq
DB search
MNWPDIILILLAVNLGDLITGPTLCHASQKHQKSECQVRNGRADCSHLRLKEIPPNLPWN
ITGLDVSHNRLVELPPASLATYPGLVHLDVGFNSLTKLEDSLCQTLGLLRTLTVQHNEVH
RLTEKDLRNCTNLTDLNLAGNRLKLQGEPFAALQSLTLLDVSKNDLKTAKLGTYLQLPSL
VTLILSSNSISTFKKDDFNFLSNSSSLRVLHLSNLTTLAKFEPDCLKPIASIHELVMNGS
KLGPSLTSKLCTELSGTAIRSLFLQKTQLVTLDNTTFKGLVKTHLTTLDLSHNSIAKIGD
GSFQWLPMLEVLSLEQSNLKRLTKNTFHGLGNLTRLNLNMALVKSHTSSYPIIDDFSFQP
LGALESLSMENTAFRNISVLTFAGLMSLRQLHLSGTSCMSLKIITNQTFVSLAHSPLLTL
KLTRTAISRLDPGAFSSLGNLTTLLLGNNSISQTLTGKEFQGLGQLQEIYLSNGNQKLIL
SPMSFVHVPALRTLMLGRALSSTMYMNTSPFKPLSNLTILDLSNNNIANIRIDLLDGLEN
LKVLKLQHNNLARLWKSANPGGPVLFLRGLRSLVALEMDFNGLDEIPEEALHGLTNLQEL
SLSGNILNQLKDSVFNDLGSLRVLRLQKNLITSVRKEVFGPALANLSQLVMEKNPFDCTC
ESILWFVVWLNGSNANVPGLRDEYVCNTPQAYYNRSIMEFDRLSCLDMTPFQALYVLTST
AVLTLMVTSLLVRFQGWRIQFYWNVLINRTLGLSDASSGERREFNYDAYVIHVAKDKTWV
DRSLIPLEKEQGYKFYLQDRDAVPGDSQLESIVENMRRSRKILFVVTETLLEDSMCRQFM
AHHALHQVIEDSRDSVVLVFLEDVQDYKLSRCLLLRRGMLRPHCILNWPLQRERVPAFHQ
RLRVALSTTNRVQ
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgaattggccagatataatcctcattctattggctgtcaatctgggtgacctcatcact
ggccctaccctatgccacgcctctcaaaagcaccagaaatccgaatgccaggtgcgaaac
ggccgggccgactgcagccacctccgcctcaaggagatacctcccaacctgccatggaat
atcaccggcctggatgtctcccacaacaggctggtggagctacccccagcatcgctggcc
acttacccagggctcgtgcacctggacgtgggcttcaacagcctcaccaagctggaggac
agcctgtgtcagaccctgggcctgctgaggacactgaccgtgcagcacaacgaggtacat
cggctgacggagaaggacctgaggaactgcaccaatctgacagaccttaacctggctggc
aacaggttgaagctacagggagagccctttgctgccctacagagtctgacactgctggac
gtgtccaaaaatgacctgaagacagccaagttgggcacctaccttcagcttccaagcctg
gtgactctcatcttgtctagcaacagcatatcaaccttcaaaaaggatgacttcaatttt
ctcagtaattcctcatccctacgagtcctccacctgtcgaatctaacaactctagcaaag
tttgagcctgattgcttgaagcccattgcaagcatacatgagttagtcatgaatgggagc
aaacttggcccttcgctcacgtctaaactttgcacagagctttctgggacagcgatccgc
agcctcttcctccagaagacacagctagttacactagacaacaccaccttcaaaggcctg
gtgaagacccacctcactactttggatctatcccacaacagcatagctaagatcggggat
ggttctttccagtggctgcccatgctggaagttctttctctggagcagagcaacctcaag
cgcctgactaagaacactttccacgggctggggaatctgacacggctcaacctgaatatg
gctctggtgaagagtcacacttcttcttaccctattatcgatgacttctccttccagcca
ctaggggcactggagagcctgagcatggagaatactgcctttcgaaacatctcggtgctc
acctttgcgggtttgatgagtctccgccaactccacctgagcgggaccagctgcatgtcg
ctcaaaatcatcaccaaccagacctttgtgtccctcgcacattcaccacttcttacgcta
aagcttacacgcactgcaatctcccgtctagaccctggagccttctccagcctgggcaat
ctcaccacccttctgctgggcaacaactccatctcccagaccctgacgggaaaagagttc
cagggtttgggccagctacaggagatctacctctctaacggcaaccagaagctcatcctc
agccctatgtccttcgtccatgtccccgctctcaggaccctgatgctggggagagctctg
tcaagcaccatgtatatgaatacctctccgttcaagcctctgtccaacctcaccatcctg
gacctcagcaacaacaacatcgccaacatcagaattgatcttctggatggactagagaat
ctgaaggtgctgaagcttcagcacaacaacttggcccggctgtggaagagtgccaacccg
ggtgggccggtgctatttcttagggggctccgcagccttgttgccctggagatggacttc
aacggtctggatgagatccccgaggaggcccttcatggattaaccaaccttcaagagctc
agcctcagtgggaacatcctgaaccaactcaaggactcagtcttcaacgacttggggtcg
ctccgggtgcttcggctccagaagaacctaattacgtcggtgaggaaggaagtgtttggt
ccggctttggccaacctcagccagctggtcatggagaagaacccgttcgactgcacctgc
gagagcatcctgtggtttgtggtgtggctgaacggatcaaacgccaatgtgccgggcctc
agggacgagtatgtgtgcaacacgccgcaagcctactacaaccgctcgatcatggagttc
gacaggctctcctgcctggacatgacaccattccaggcgctctacgtgctcaccagcact
gcggtcctgaccttaatggtgacctcactcctagtgcgcttccagggttggaggattcag
ttctactggaacgttctgatcaaccgtacactcggattgagcgatgccagttccggggag
aggagagagttcaactacgacgcgtacgtcattcatgttgcaaaggataaaacctgggtg
gatcgaagcttgatccccttagagaaagaacaggggtataaattttatctgcaggatcga
gatgcagtgccaggtgattcgcaactggagtccattgtggagaatatgagaaggtccaga
aaaatactatttgtggtcaccgaaactcttctcgaagactccatgtgtcgacagttcatg
gcccaccacgccctgcaccaggtgatcgaggacagccgggactcggtggtgctggtcttc
ytggaggacgtgcaggactacaagttgtcccgctgtctgctcctgcgcaggggcatgctt
cgtccacattgcatcctcaactggcccctgcagagggagagggtgcccgccttccaccag
aggctccgcgtcgccctgagcaccaccaaccgagtgcagtaa
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