Salvelinus sp. IW2-2015 (Arctic char): 111971921
Help
Entry
111971921 CDS
T05762
Symbol
nyx
Name
(RefSeq) nyctalopin
KO
K08129
nyctalopin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
salp00535
]
111971921 (nyx)
Proteoglycans [BR:
salp00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
111971921 (nyx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LRRNT
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
111971921
NCBI-ProteinID:
XP_023854482
LinkDB
All DBs
Position
LG2:40890295..40898196
Genome browser
AA seq
481 aa
AA seq
DB search
MILIALTVSVLCLFPQAALALWACARSCPASCTCTLEKSCSVLCDRSGLPDLPREFPCEA
SSINLDKNSLKFLSERAFGTLPSLRSLSLDHNNISFITPGAFKGLPNLVELKMAHNEYIR
YLHTRTFTGLKRLVRLDVADCNLFNMPDRIFLENYALKELFCFQNNFRRIPGAFRGMENL
THVYLERNKIEAVAYNSLLGLGNLRYLNLQENRINVIHDQSFQDLLRLENFYLNDNLLSE
LPRVAFKGLSRLKMLNLGGNQLTNISKTWFSDLVELEVLYLDRNRLVYIEEGSFENLTSL
ITLHLNSNNLSSLPFPVFQPVYFIGRLYLFRNPWECDCSLEYLKEWMESYKLVRDIPCAS
PSSVVGLDLSEVVFARVNGSCLDPGELNLTTMSSEILSTTENRFNSLISKLLQQELREEV
GNGTESLRNGTLLDPAEGLSAGIKGADVSQSLVSLLVIWCVFWMTIGQLDVDFLFGHVTG
T
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgattctcattgctttaacagtctctgtcctgtgcctgtttccccaggctgcgctggct
ctgtgggcgtgtgcacgctcctgcccagcctcttgcacgtgcacgctggagaagagctgc
agtgtgttgtgtgaccgctcgggcctacccgacctgccccgggagttcccctgtgaagcg
tcctccatcaacctggacaagaacagccttaagttcctgtctgagagggcctttggtacc
ctgccgtccctcaggtccctgtccctggaccacaacaacatctccttcatcacccctggg
gccttcaagggtctgcccaacctagtggaactgaagatggcccacaatgagtacatccgt
tacctccacacccgcaccttcaccgggctcaaacgcctggtccgactggacgtggccgac
tgtaacctcttcaacatgcccgaccggatctttctagaaaattatgctctgaaggaactc
ttctgcttccagaacaacttccgaaggattcctggagcgttccgtgggatggagaacctg
acccacgtctacctggagcggaacaagatcgaggcggtggcatataactctctcctgggc
ctggggaacctcaggtacttgaacctccaggagaaccgcatcaacgtgatccacgaccag
tcctttcaggacctcctgcgcctggagaacttctacctcaacgacaacctgctgtctgag
ctgcctcgggtggccttcaagggccttagccgcctcaagatgctcaacctggggggcaac
cagctcaccaacatctccaagacctggttcagcgacctggtggagctggaggtcctctac
ctggaccgcaaccgcctggtctatatcgaggagggctcctttgagaacctgaccagtctg
atcaccctccacctcaacagcaacaacctcagctccctgcccttccccgtcttccagcct
gtctacttcatcggacgcctctacctcttcaggaacccctgggaatgtgactgctctctg
gagtatcttaaggagtggatggagagttataagttggtccgggacatcccctgcgcctcc
ccgtcctccgtggtcggcctagatctgagcgaggtagtcttcgccagggtgaatgggtcg
tgcctggatccgggggagctgaatctgaccacgatgtcttcggagatcctctcgaccacg
gagaaccgtttcaacagcctgatctccaagctgctacagcaggagctcagggaagaggtg
gggaatgggacggagagcctgaggaacgggaccctgctggaccccgcagagggactcagc
gctgggatcaaaggggcagacgtcagccaatcactggtctcattgttggtgatatggtgt
gtcttctggatgacgattggccaattggatgtggatttcctgtttgggcatgtgactgga
acctga
DBGET
integrated database retrieval system
