Salvelinus sp. IW2-2015 (Arctic char): 111972002
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Entry
111972002 CDS
T05762
Name
(RefSeq) non-muscle caldesmon isoform X1
KO
K12327
caldesmon
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
111972002
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111972002
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
111972002
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Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
111972002
NCBI-ProteinID:
XP_023854592
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Position
LG13:4612535..4656197
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AA seq
591 aa
AA seq
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MSHAVLRRNSSKQGLQNLLKITAQRSVEDAEEVERERRRRARESFRSMGSSSTLGPGGPS
LDNGALAEDGLYERDLKPSSSSPSMEEDEGFSDWTQRLERRRQQAQRMEELSQATVEQDQ
RPLNGAAKPPTPHTLSGSATPTTSTSRQQRHKAEVEDEEEKKWGRKESERKGREREEKVV
REEREREEEAEKQRQEQIRVLKKREENQRPDAGEKVKEKSKEVKVSYTSKVVLHTEAKHG
NVNGDTAGEKVTSYMVKTKLSAPRAVVQMAAAEAEEEAILETEAKLEKIRRSHAEKENQE
LEQLKHKQVEAEQELEELKRRREERRQVRKEEERRSREEEQQRLAKEEEEKRRMKEDIER
RRMEAAERMKSLSTSSVDGDEMFSPLSPKGSIYKITERTESLNRSLKKSNSFKKTQPPVL
LAKIDDRLEQYTTAIEYSQEVKATKQGLTDIPMSPEPVSSKKNLFEAGEAWNQSLAKGTP
PKQDAESLKVGVADMITQWVKGNPDGTNRSSPSRPADVKAGDVMQKKNMWEIIGETSPGI
SGAVAKGNASGKKYKFVMTAHGKYEKIPVDDDYENMDEYTNGKADLYHGEY
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatgctgtcctgagaagaaactccagcaagcaaggtttgcagaacctcttgaaa
ataaccgcccagaggagcgtcgaggatgcagaggaggtggagcgagagcgtcggcggagg
gcccgggagtccttccgcagtatgggcagcagcagtaccttgggccctggaggcccctca
ctggacaatggggccttggcggaggacggcctgtatgagagggatctgaagcccagcagc
agctctccctctatggaggaggacgagggcttcagtgactggacccagcggctggagaga
cgcaggcagcaggcccagcgcatggaggagctcagtcaggccacagtggagcaggaccag
aggcccctgaacggtgccgcaaagccccccacaccacataccctctctggctcagccacc
cccaccacatccacctctcgccagcagagacacaaggcagaagtggaggatgaagaggag
aagaagtggggaagaaaggaaagtgagaggaaagggagggagcgagaggagaaggtggtt
agagaagagagggaaagagaagaggaggcagagaaacagaggcaggagcagataagagtg
ctgaagaagagagaggagaaccaaagacctgatgctggggagaaggtgaaagagaagagc
aaagaggtgaaggtctcgtacacatccaaagtcgtcctgcatacagaggcaaagcatggc
aacgtcaacggagacacagctggggagaaagtgacatcatacatggtcaaaaccaaatta
agtgctcccagggctgtggtacaaatggcagcggcagaggctgaggaggaggccatcttg
gaaacagaggccaagctggagaagatccgacggagccatgcggagaaggaaaaccaggag
cttgagcagctcaaacacaagcaggttgaggccgagcaggagctagaggagctgaagagg
aggagggaggagagacgccaggtcaggaaggaggaggagcgcaggagcagagaggaggag
caacagcgtctagccaaggaggaggaggagaagaggaggatgaaggaggacatagagagg
aggaggatggaggcagcagagcggatgaagagcctcagtacctccagcgtggacggagat
gagatgtttagcccgctcagtcccaaaggctccatctacaagatcacagagagaacggaa
tccttgaaccgatccctaaagaaaagcaacagcttcaagaagacacagccccctgttctc
ctcgccaagatcgatgacaggctggagcaatacaccaccgccatcgagtactcccaggag
gtcaaggcaaccaaacagggcctaacggacatccccatgtcgcctgagccagtgtcctcc
aagaagaacttgtttgaggctggagaggcctggaaccagagcctggccaaaggcacacca
cccaagcaggatgctgagagtctgaaggtgggcgtggcggacatgatcacccagtgggtg
aaggggaacccagatggcaccaacaggagctccccctcaagaccagctgatgtaaaagct
ggtgacgtgatgcagaaaaagaacatgtgggagatcattggagaaacatcccctgggatt
tcaggagcagtggcaaagggcaatgcatctggtaaaaagtacaaatttgtgatgactgct
catggcaaatatgagaagattcctgttgatgatgattatgaaaatatggatgaatacacc
aatggaaaagcagacctataccatggtgaatattga
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