Salvelinus sp. IW2-2015 (Arctic char): 111972090
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Entry
111972090 CDS
T05762
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X1
KO
K24650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111972090
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
111972090
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF4763
PI3K_P85_iSH2
MlaC
DUF4164
Motif
Other DBs
NCBI-GeneID:
111972090
NCBI-ProteinID:
XP_023854699
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All DBs
Position
LG13:10334107..10341074
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AA seq
296 aa
AA seq
DB search
MGGVKQEQNDGPPPRGTQSSDAVQEEPVKKRGWPKGKKRKKVLPNGPKAPVTGYVRFLNE
RREQIRAKHPDLPFPEITKRLGAEWSRLAPHDKQRFLDEAEREKLQYARELREYQQSEAY
QITSAKIQDKKVKREESPSVIINANSSGSAALKGSDHLSNRFDVPIFTEEFLDQNKAREA
ELRRLRKANVEFEEQNAVLQKHISDMYSAKERLEAELGQDELRTQALHRHLLAIKHTLVS
SLSTVALPGTGETPSLGTLDSYLSRLSGTLESNPHEHRALLAQLHDVLSHLDSEKL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtgtgaagcaggagcaaaatgatggacctccaccaagaggcacgcagtcctct
gatgcagtacaagaagagcctgtgaagaagagaggttggcccaagggtaagaagagaaag
aaggtgttgcccaatggtcccaaggcaccagtgacaggatatgtgcgtttcctgaatgaa
cggcgggagcagatccgtgccaagcaccccgacctgccctttccagaaatcaccaagagg
ctgggcgcagagtggagccgcttagcacctcatgacaagcagcgcttcctggatgaggca
gagcgagagaagctgcagtatgcccgggagctgagagaataccaacagagtgaggcctat
cagatcaccagtgccaagatccaggacaagaaggtcaagagagaagagtctccatctgtc
attatcaatgctaacagttctggatcagctgctctgaagggttcagatcatctgtccaac
agatttgatgttccaatatttacagaggaattcctggaccagaacaaggcccgggaagcg
gagctgcggcgtttacgcaaagcaaatgtggagtttgaggagcagaacgcagtgttgcag
aagcacatttcagacatgtacagcgctaaagagagactggaagctgaactggggcaggat
gagctccggacgcaggctctgcacaggcacctgctggccatcaaacacaccctcgtcagc
agcctgtccactgtggccctgccaggcacaggtgagaccccctctcttggtaccctggac
tcttacctgagtcgcctgagtggtactctggagagcaatcctcatgagcaccgtgccttg
ctggctcagcttcacgatgtcctttctcaccttgacagtgagaaactatga
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