Salvelinus sp. IW2-2015 (Arctic char): 111972155
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Entry
111972155 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-binding protein RFX2-like
KO
K09173
regulatory factor X 1/2/3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111972155
Transcription factors [BR:
salp03000
]
Eukaryotic type
Other basic domains
RF-X
111972155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
ThermoDBP-RP_arch
Pox_D5
Motif
Other DBs
NCBI-GeneID:
111972155
NCBI-ProteinID:
XP_023854806
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Position
LG13:complement(13453299..13512044)
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AA seq
732 aa
AA seq
DB search
MQSSDGGSDSPSSVALRTSTSTQAPVVQPVPASQQRVLVQATGSAQKGAQVQQLSVPRVQ
QVPQQVQQVQHVYPSQVQYVGEGGEAVYSNGTIRTAYSYNPEAQLYGQGSGGAYFDSQGG
GAQVTTVVSSAGGGPPHGMVGIAMDVGGSQVISGGGTYLIHGGGMDGGRHHASHSSRSSS
AMLEMAIENLQKSEGIATHKSSLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEQK
LDPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDSQYMAMRQ
QPMHQKQRFKPLQKVDGMGDSLSGGSQHSASTPEQSVAAQSQHHQQYIDVSHVLPPFPTP
DLGTQPLPERININDVKKLQNLYRDHCEATLDVVMNLQFHYIEKLWQTFWYSTAPSSDVT
ITIPNSDEDMEGVIPREKLMALCKYEPVKLWMRSCDHILYQALVEILIPDVLRPVPSTLT
QAIRNFAKSLEGWLTTAMSDFPNEIVRTKAAVVSAFAQTLRRYTSLNHLAQAARAVLQNT
SQINQMLSDLNRVDFANVQEQASWVCQCDETVVQRLEQDFKVTLQQQSSLDQGAAWLDNX
VNQVLKPHEGSTSFPXAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFY
LVEHRVAQATGETPIAVMGEFSDLNSMLPMLMDKDPSFSDDMSDMGSDEGRGPNEPAVKR
ERIEINHSLQEI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcagagttcagatggagggtccgattcaccgtccagtgtggcgctgcgtacgtccacc
tccacccaggcccccgtggtgcagcccgtcccagcctcacaacagagggtgctggttcag
gccacaggttcggcccagaagggagcgcaggtgcagcagctgtcagtccctcgggtgcaa
caggtccctcagcaggttcagcaggtccagcatgtttacccctcccaggttcaatatgta
ggagaggggggagaggcagtttacagtaatggaaccatccggacagcctactcctataac
cctgaggcccagctgtatgggcaaggtagtggaggagcctactttgactctcagggtggg
ggtgcccaggtcaccacggtggtctcctcggccggcggcgggccgccccacggtatggtg
ggcatcgccatggatgtgggcggtagtcaggtcatctccggtggcggcacctacctgatc
cacggcgggggcatggatgggggtcgccaccacgcctcacactcttcccgctcctcctcc
gctatgcttgaaatggcgattgaaaacctccaaaagtctgaagggattgcaactcacaaa
agcagcctgctcaacagccatctgcagtggctgctggataactatgagacagcggagggg
gtgagcctgccccggagctccctctacaaccactacctgcgccattgtcaggagcagaaa
ctggacccggtcaacgctgcctccttcgggaaactcatccgctcggtcttcatgggcctc
aggacccgccgcctcggcactaggggcaactccaagtaccactactatggcatcaggctg
aagccagactcaccactcaacagactgcaagaggactctcagtacatggccatgagacag
caacccatgcaccagaaacagaggttcaagcccctccagaaggtggatggcatgggagac
agcctgtcaggaggctcccagcactcagccagcaccccagagcagtctgtggcagcccag
agccagcaccaccagcagtacattgatgtgtcacatgtcctgcccccgttccccacccct
gacctgggcacccagcccctccccgagcgtatcaacataaatgatgtgaagaagctgcag
aacctgtacagggaccactgtgaggctactctggatgtggtgatgaacctccagttccac
tacattgagaagctgtggcagaccttctggtattcaacagcgccatctagtgacgtaacc
atcaccatccccaacagtgatgaggacatggagggcgtgatcccaagggagaagctgatg
gctctgtgcaagtatgagcctgtcaagctgtggatgaggagctgtgaccatatcctgtac
caggccctggtggagatcctcatccctgacgtgctacgccctgtccccagtactctcact
caggccattcgcaactttgccaagagtctggagggctggctgaccacagccatgagcgac
tttcccaatgagattgtacgcaccaaggcagcggtggtgagtgcatttgctcagaccttg
cgtcggtacacctctctgaaccacctggcccaggcagcccgcgccgtgctgcagaacacc
tcacagatcaatcagatgctcagcgacctcaaccgcgtcgacttcgccaacgtacaggag
caggcgtcgtgggtatgccagtgtgacgagactgtggtccagcggctggagcaggacttc
aaggtgaccttgcagcagcagagctctctggaccagggggccgcctggctggacaacngt
gtcaaccaggtgctcaagccccacgagggcagcaccagcttcccangggctgcaagacag
ttcctgctgaagtggtccttctacagctccatggtgatcagggacctgaccctgcgtagt
gctgctagtttcggctccttccatctcatcaggctgctctacgacgagtacatgttctac
ctggtggagcaccgcgtcgcccaggcaaccggagagacgcccatcgctgtcatgggagaa
ttcagtgacctaaactcgatgctgcccatgctcatggataaagacccgtccttctcagac
gacatgagtgacatgggaagtgacgagggccgagggcccaacgagccggctgtgaaaagg
gagaggatcgaaatcaaccactcgctgcaagagatctga
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