Salvelinus sp. IW2-2015 (Arctic char): 111972186
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Entry
111972186 CDS
T05762
Name
(RefSeq) transcription factor Sox-2-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111972186
Transcription factors [BR:
salp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
111972186
BRITE hierarchy
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
111972186
NCBI-ProteinID:
XP_023854848
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Position
LG13:14975500..14977514
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AA seq
315 aa
AA seq
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MYSMMETELKPTAPQTNSGVTGNSNSSGNNQKNSPDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKD
KYTLPGGLLAPGGNGMGAGVGVGGGLGGGVNQRMDSYAHMNGWTNGGYGMMQEQLGYGQH
PGLNAHNTAQMQQMHRYDMSALQYNSMTNSQTYMNGSPTYSMSYSQQSTPGMTLGSMGSV
VKSESSCSPPIVTSSSHSRGAPCQTGDLRDMISMYLPGAEVPEQTAQSRLHMSQHYQSAP
VPGTTINGTLPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatggaaactgaactgaaaccaaccgcaccccagacaaattctggggtt
acggggaattcaaattcatctggaaacaaccagaaaaacagtccggaccgagtcaagaga
cccatgaatgccttcatggtttggtcgaggggacaacgaagaaagatggcacaggaaaac
cccaaaatgcacaattcggaaataagcaaaagacttggggccgagtggaagcttctatcc
gaaagcgaaaagcgacctttcattgacgaagcgaagcgtctccgggctctccacatgaag
gaacatccggattacaaatacagaccccggaggaaaaccaagacgctgatgaagaaggac
aagtatactctgccaggtgggctgcttgcgccaggcggcaatggcatgggcgctggagtg
ggtgtcgggggaggcttgggcggtggggttaatcaaaggatggacagttacgcacatatg
aacggctggaccaatggaggttatggcatgatgcaggagcagcttggctacgggcagcac
cccggtttaaacgctcacaacaccgcgcagatgcagcaaatgcaccgctatgacatgagt
gcacttcagtacaactccatgactaactcccagacctacatgaacggatcacccacgtat
agcatgtcctactcacagcagagcactcctggaatgactctgggctccatgggttcggtg
gtcaagtcagagtccagttgcagtccccccatagtcacgtcgtcgtctcactcaaggggt
gctccgtgtcagactggagacctacgggacatgatcagtatgtacttaccgggtgctgag
gtgccggagcaaactgcccaaagcagactccatatgtcccaacattaccagagcgcacct
gtaccaggcacgacgattaatggcacactcccattatcacatatgtaa
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