Salvelinus sp. IW2-2015 (Arctic char): 111972217
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Entry
111972217 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03030
DNA replication
salp03410
Base excision repair
salp03420
Nucleotide excision repair
salp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111972217
03410 Base excision repair
111972217
03420 Nucleotide excision repair
111972217
03430 Mismatch repair
111972217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salp03032
]
111972217
03036 Chromosome and associated proteins [BR:
salp03036
]
111972217
03400 DNA repair and recombination proteins [BR:
salp03400
]
111972217
DNA replication proteins [BR:
salp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111972217
DNA Replication Termination Factors
ELG1-RFC complex
111972217
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
111972217
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111972217
Check point factors
HRAD17(Rad24)-RFC complex
111972217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_16
AAA_30
AAA_assoc_2
AAA_11
AAA_22
DUF815
Mg_chelatase
RuvB_N
AAA_5
AAA_24
SLFN-g3_helicase
AAA_28
AAA_19
AAA_14
Gp44_lid
RPA_interact_N
Cdc6_lid
ResIII
AAA_7
Kinesin
ATPase_2
AAA_3
Motif
Other DBs
NCBI-GeneID:
111972217
NCBI-ProteinID:
XP_023854910
LinkDB
All DBs
Position
LG13:complement(17277486..17285419)
Genome browser
AA seq
357 aa
AA seq
DB search
MQAFLKGTSTQGTRPLKEKGAGTSGEKKQKSVPWVEKYRPKCMEEVAFQEEVVAVLKKTI
EGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVKRF
AQLTVAGHRTDGKPCPPFKIIILDEADSMTNAAQAALXRTMEKESRTTRFCLICNYVSRI
IEPLTSRCSKFRFKPLANQVQEERLLEICYKENLKYSKEGIAALVKVSEGDLRKAITFLQ
SAARLNTDNEITESAVIEIAGVVPPKTIDNLLKICYKGTFEKLEIAVWNMVDEGYAATQI
INQLHEAIIEEELNDKQKSAITEKMAVVDKCLVDGADEYLQMLSLCSVILQQATQSN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttttgaaaggaacatctactcaaggcaccagacctctgaaagagaaaggt
gccgggaccagtggagagaagaagcagaagtctgtcccctgggttgagaaatatagacca
aaatgtatggaagaggtggcgtttcaagaggaggtggttgctgtgctgaagaagactata
gagggcgctgatctccccaatctgctgttctatggaccacctggaacaggaaagacgtcc
accatcctggctgcagccagggaactttatgggccagagctgtaccgacagagagtcctg
gagctgaacgcctctgatgagagagggattcaggtggtcagagagaaagtcaagagattt
gcccagctgactgtagcaggacaccgcactgatgggaaaccatgcccaccctttaagatc
atcatcctggatgaggctgactcaatgaccaacgctgctcaggctgctctgnnacgcacc
atggagaaggagtcccggaccacccgcttctgtctcatctgcaactatgtcagcaggatt
attgagcccttgacatccagatgctctaaattccgcttcaaacctctggccaatcaggtc
caagaagagcgcctgctagaaatctgttacaaggagaatctcaagtactcgaaggaggga
attgcagcgttggtgaaggtttcagagggggatctgagaaaagccataacctttcttcaa
agtgctgcacggctgaacacagataatgagatcacggagagcgcggtcatagagatagca
ggggttgttccccccaagacgatcgacaatttgcttaaaatctgttacaagggcacattt
gaaaaactagagattgctgtttggaacatggtagatgaaggctatgccgccacacagatc
atcaaccagctacacgaagccatcatagaggaagagctgaatgacaagcagaagtctgcc
atcacggaaaagatggcagtggttgataagtgtctagtggatggtgcagatgagtacctg
cagatgctgagtctgtgttctgtgatcttgcagcaagccacccagagtaactga
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integrated database retrieval system
