Salvelinus sp. IW2-2015 (Arctic char): 111972225
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Entry
111972225 CDS
T05762
Name
(RefSeq) guanine nucleotide exchange factor DBS-like isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111972225
Membrane trafficking [BR:
salp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
111972225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
PH_10
DUF7799
GlutR_dimer
Spectrin
Motif
Other DBs
NCBI-GeneID:
111972225
NCBI-ProteinID:
XP_023854919
LinkDB
All DBs
Position
LG13:17588236..17662272
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AA seq
1242 aa
AA seq
DB search
MLCWLIEDEMSLQEFQQRVGCVITHVDEIMQQEIRPLLAVDIIEQLHRQFALLSGGRGKD
GAPIITFPEYSGFGDLVAEDFQNVVTYLTSIPSLDVASIGFVIIIDRRRDKWSSVKASLT
RIAGAFPGNLQLVLVLRPSRFFQRAIADIGIKLHRDDFKMKVPIVMLNSLSDLYGYVDKG
QLTCELGGNLDYCHSQWIHRRTAIENFAVTVKTTAQMLQKFGTDLAETELPNDVQCTKDL
LTTHTEKHDKLKDELKLAMKQGTTLLGCIKEQAAKSENHQLNPDEMENHTTVERLLAQLD
ETENAFEQFWSKHHLKLEQCLQLRHFEHDFREVKVSLDSLMATLTALSDIGDCVTLVEML
LKDLKTLEEKAQESLEKAQLHALHGDQLIQSNHYSVDSIWPKCVELRHICDDFTNEAQKK
YDVLSKSRQIHKGIDKVNQWCESGVYLLASQAVDKCQSQEGAEAALQDIEKFLETAKENQ
LSDLKNIHNQYELVLNVEVKANVQKALKRLDDVQEMFEKRQVSLKKLSAKQTRPVQPVAP
RPESSPKRPAPHKTPRTTCPAPALSRRISENSSATKQPTEAELAKRKNVSRKVKGSLKIE
VMHEASQGGSSHVLVTNETEESLSNRRRHIMNELIETERLYVEELQSIIEGYAAELDNTE
LSPLIPAALENKKDVLFGNLPEIYEFHNRTFFKELENCMERPELVGTCFLKRKEELQIYE
KYCQNKPRSEALWRQCGDSLFFQECQKKLDHKLSLDAYLLKPVQRITKYQLMVKEMLKCS
KNQEGTVELEEALATMLDIIKSVNDSMHQIAITGFEGNLSELGKLLMQGSFNVWTDHKKG
HSKVKDLARFKPMQRHLFLYNKMLLFCKKREETTDGHEKPSASYSFKHSLKMSAVGITEN
VKGDIKKFEVWYNGREEVYIIQAPSMDVKNMWVSEIRKVLTGQLEACREASQLHQKITEN
VYHAPMRNIRKMALRQSDSSSPETGFRRSNPSPNMRQKRADASATNNPDHNGYLARKRFT
LQGLSNRRSLPSAEPPSKETDVTRRFSVASSISVSATSRTKGPPSTNVRKTKRHEIKSDP
TPFGYEDTLCGAIPAASRHKGTTGTDSAVPRSTSQPGWTQRCLPSMDTEDFETIHSSAEE
LSNSSDGEDDSSNKNDHDRFRVQLNIRVEDGAGPVSGVRRFSTVPEGGRGWPLISSVTCA
QQLCLTLRKMKTLRGEMYLRTADRHDGPFGHELLEHAGSPTW
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgctctgctggctgatagaagatgagatgtctctgcaggagttccagcaacgtgtgggc
tgtgtcatcacacatgtcgatgagatcatgcagcaagagatcaggccgttgctggctgtc
gacatcatagagcagctgcaccggcagtttgccctgctctcaggaggaagagggaaagat
ggtgccccaatcatcaccttccctgagtactcaggcttcggcgacctcgtagcggaggac
ttccagaatgttgtaacatatctgaccagcatccccagtttggacgtggccagcatcggt
ttcgttataatcatcgaccgcaggcgggacaaatggagctcagtgaaggcctcgctgacg
cggatagcgggagcatttccagggaacctccagctggtgttggttctaaggccctcccgc
ttcttccagagggccatcgctgacattggcattaagctgcaccgggatgactttaaaatg
aaggtaccgattgtgatgctcaactccctatctgacttatatggctacgtggataagggc
cagctaacatgtgagcttggtgggaacctggactactgtcacagccagtggatccaccgc
cggacagccattgagaactttgctgtgacggtgaagaccacggctcaaatgctgcagaag
ttcggtacagacctggcagagacggagctgcccaatgatgtgcagtgcaccaaagaccta
ctcactactcacactgagaagcacgacaaactcaaggatgaactgaaattagcgatgaaa
cagggaaccactctactgggctgtatcaaagagcaggctgccaagtctgagaaccaccag
ctaaacccagacgagatggagaaccacaccactgtggaaaggttgttggcccagctagat
gagacagaaaacgcgtttgaacagttctggtccaaacatcacctcaaactggagcagtgc
ctacagttacgccattttgagcatgacttccgagaggtgaaagtgtcattggacagtctg
atggcgactctgacagccctgtcagacattggggactgtgtcaccctggtagagatgtta
ctgaaggacctcaagaccttagaggagaaggctcaggagtcgttagagaaggcccagctc
catgccctacacggggaccagctgattcagagcaaccactattctgtggactccatatgg
cccaagtgtgtggagctccgacacatctgtgatgacttcaccaacgaggcccagaagaag
tacgacgtcctctccaaatcacgccaaatacacaaaggcatagacaaggtgaaccagtgg
tgtgagtcgggggtgtacctgctggcctctcaggctgtggacaagtgccagtcccaggaa
ggggctgaggcagccctgcaggacattgagaagttcctggagacggccaaggagaaccaa
ctgagtgatctcaagaacatccacaaccagtatgagctagtcctcaacgttgaagtcaag
gctaatgtacaaaaggctctaaagaggctggacgatgtacaggagatgtttgagaagaga
caggttagtctgaagaagttgtcagccaaacagacccggcccgtccagcctgtggccccc
cggcctgagtcctctcccaaacggcctgcgccccacaaaacacccaggactacctgccct
gcccctgcactcagtcgaaggatctcagagaactctagtgccacaaagcagcccacggaa
gctgagcttgcaaaaaggaaaaatgtaagccgcaaagtcaaagggagcctcaagattgag
gtaatgcatgaggcaagccagggaggctccagccacgtcctggtgacgaacgagacagag
gagagtctttcaaacagacggagacacatcatgaacgagcttattgaaactgagaggctg
tacgtcgaggagctgcagagcatcatagagggatatgctgccgagctggacaacacagag
ctttcccccctcatccccgcagccctggagaacaagaaagatgtactgtttggcaatctc
ccagaaatatatgaatttcacaacaggacatttttcaaagagcttgaaaattgcatggaa
aggccagaattggtagggacctgctttttgaaaaggaaagaagagctgcagatctatgag
aagtattgtcagaacaagcctcgatcagaggcactgtggagacagtgtggagatagcctg
ttcttccaggaatgtcagaagaagctggaccacaaactctccctggatgcctatttactc
aagcctgtgcagaggatcaccaagtaccaactgatggtcaaggagatgctgaaatgcagt
aagaaccaggagggtactgttgaattggaggaggcccttgccaccatgctggacatcatc
aagtctgtcaatgactccatgcatcaaattgccataacgggattcgaggggaaccttagt
gagctgggcaagctcctgatgcagggctcattcaacgtgtggacggaccacaagaagggc
cacagcaaggtgaaggacctggcccgcttcaagcccatgcagaggcacctgttcctctac
aataagatgctgcttttctgtaagaagcgggaggagaccacggacggacacgagaagccg
tccgcctcatatagcttcaaacactccctaaagatgagtgctgtgggaatcaccgaaaat
gtcaaaggagacattaagaagtttgaggtctggtataacggcagagaggaagtttatatc
attcaggctccctccatggatgtgaagaacatgtgggtgtcagagatccggaaagttctg
acaggccagctagaagcttgcagagaggctagtcaactccatcagaagatcactgagaat
gtgtatcatgctcccatgagaaacatacgcaaaatggccctgaggcagtcggactcgtct
agcccggagacaggcttcaggaggagcaaccccagtcccaacatgagacagaaacgagct
gatgcttctgccactaataaccctgaccacaatggttatctcgctagaaagcgtttcacc
ttgcagggcctctccaacagaaggtctcttccctcagccgagcctccatctaaggagaca
gatgtcacacgccgcttctctgtagcctcctctatcagtgtctctgccaccagccgcaca
aaaggtcctccttcaactaatgttagaaagaccaaaagacatgagataaaaagtgatcca
acaccgttcggttatgaagatacattatgcggtgctatccctgctgcgagcagacacaaa
ggcaccacaggcacagattcagccgtgcctagatctacmtctcaaccaggctggacccaa
cggtgtttgccttcaatggacacagaggactttgaaaccatccattcgagtgcagaggag
ctctccaactcttcagatggcgaggatgattccagtaataaaaatgaccatgatcgcttc
cgtgtccagttgaacatacgagtcgaggacggcgcaggacctgtctctggagtcaggaga
tttagtacagttcctgaaggaggcagaggatggccactgatatcttcagtgacatgtgca
cagcagctctgtctgactctgaggaaaatgaaaaccctacgtggggagatgtatctcagg
acagcagataggcacgatggaccatttggccatgaacttctggaacatgctggtagccca
acttggtaa
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