Salvelinus sp. IW2-2015 (Arctic char): 111972252
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Entry
111972252 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111972252
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111972252
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111972252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4_2
zf-RING_5
zf-RING_2
TRAF3_RING
Prok-RING_4
Cas12f1-like_TNB
Bac_rhodopsin
PRP4
Motif
Other DBs
NCBI-GeneID:
111972252
NCBI-ProteinID:
XP_023854965
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All DBs
Position
LG13:19471087..19488956
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AA seq
235 aa
AA seq
DB search
MNQTMQPSHSSHPRSSEHTQDRTALKRVSYNKNTSQICPSAGHRDWLCPVCLQTASFPVQ
TNCGHLFCAPCLISYWRLRSWLDAISCPLCRQRVSVLCRLFGEGRSDRKEREVLGEITDY
NKRYSGTPRRVTDYLCDTPLFLQLLAXSLGAMGGLVCLFFVRVVLCCLGAMVSLSSAPLD
TPSSLSGLLGVLDDLVVVFLLLTCVININQQMAPESGNSSAHTATQGVGLLSNSL
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaccatgcaaccctcccacagctctcatcccagatcctcagaacacacacag
gaccgaacagccctcaaacgtgtaagctacaacaagaacacctctcagatctgtccatct
gcgggccacagagactggctctgccctgtgtgtctgcaaactgccagcttccctgtacag
accaactgtggccatctcttctgtgctccctgtctgatctcgtactggagacttaggtcc
tggctggatgccatcagctgccctctgtgtagacaaagggtcagtgtcctgtgtcgtcta
tttggtgagggtcggtcagacagaaaggagagggaggttctgggagaaattacagactac
aacaaacgctactcaggaacccctcgaagggtgacagactacttgtgtgacacgcccctg
ttcctgcagctgctagctcycagcctgggcgctatgggggggctcgtgtgcctcttcttt
gtcagagtggtgctctgctgtcttggggccatggtgtccctctcctctgcccccctggac
actccatcctccctgtctggcctcctgggggtcctggatgacctggtggtggtcttcctg
ctgctcacctgtgttatcaacatcaaccagcaaatggcgccagagagtgggaactcctca
gcacacacagccacacagggagtaggtctgctcagtaactcgctgtag
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