Salvelinus sp. IW2-2015 (Arctic char): 111972289
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Entry
111972289 CDS
T05762
Symbol
usp24
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 24
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
salp01002
]
111972289 (usp24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111972289 (usp24)
Enzymes [BR:
salp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111972289 (usp24)
Peptidases and inhibitors [BR:
salp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111972289 (usp24)
Ubiquitin system [BR:
salp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111972289 (usp24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
DUF3517
UBA
UBA_7
ubiquitin
Motif
Other DBs
NCBI-GeneID:
111972289
NCBI-ProteinID:
XP_023855019
LinkDB
All DBs
Position
LG13:21146355..21193834
Genome browser
AA seq
2618 aa
AA seq
DB search
METEEEQHMTTLLCMGFPDAVAIRKALRLAKNDINEAVALLTNESPGLGYGYEPMESGPA
PGPSGDGESSGRTGTGGFDPPPAYHDVVESERSNDENGNCSGSSMEFPTTNLYELENRVF
TDHWSIPYKREESLGKCLVAATCLAKHGLADADENCKQFMDRCMHEAFKKLLTSSAVHKW
GTEIHEGIYNMLMLLVELVAERVKRDPIPVGVMGVLTIAFNPDNEYHFKNRMKTCQRNWR
EVFGEEAMFAVSPSNSYQKEPHGWLVDLVNRFGEMGGFTAIQAKLNTQEIEIGCVSALVQ
PLSVCAEYLNSSLVQPMLDPVIHKMITYVQNLEEKDLKDKRLVSIPELLSAIKLLCMRFQ
TTLVTVVDDLRLDTLLRMLKTPHFSTKMNSLKEVTKLIEESTVSKTVKNAIDTDRLLDWL
VENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSLDELSKIWMIQAGQSSTVIENIHTI
MAAAAVKFNLDQLSHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSEATTGKVLEVLW
ELAHLPILPTSLVQQASEEHLAILTDAYAVKETVKRCYIIKCIEDIKKTQTEEQGKTSDI
QSSFLTGSWGKKKAKENSLAKSSQQGSPQAVWVVPALRQLHEITRSFIKQTYQKQDKSII
QDLKKNFEIVKLITGSLVVCHRLAVSAAGSNGLAGYTLVDGRYTYQEYLDGHLKFLAFFL
QEASLYLVWNRAKELWDCLVSGPEVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKL
EPYEITMNGFNLFKTFFENVNLCDHRLKRQGTQLCVERLDLSGMDFIWRIAMETPDEEIA
NEAIQLIITYSYTNLNPKMKKDSVSLHKKFIADCYKRLEXASSALGGPTLTHAVTRATKM
LTATAMPTVATSVQSPSRSTKLVIIERLLLLAERYVITIEDLYSVPRTILPHGASFNGHP
VSLHVTYESTKDTFTLEAHSNETVGSIRWKIAEHLSCPVDNVQIFANDSVLTMNRDQKLL
SQLGFSDEQSLTVKSSGTGTPSGGSSESSASASSSSSAVFNSAYAMEQEKSLPGVVMALV
CNVFEMLYQLANLDEPRTTLRVRKLLLLIPTDPEVQDALDNFVPKESSVWSHQKTLFTLG
QGSGSRSPSLGSKQQHQPSAASILESLFRSSAPGMSTFRVLYNLEVLSSKLMPTSDDEMA
KTSVKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQLARFLLVGQSMPS
LLDDDVIREGDTLSSRPFRNAGRPGRQLSLCGTPEKSSYRQMSLSERSSIRVEEIIPAAR
VAIQTMEVGDFTSTLACFMRLTWAAAAGRLDLVGSPQPIRPEHSSLLPLGVRTRVSSTGS
NCSSSSEGEAPPTALHAGICVKQQSVSIKDCIIAREALSXXXTCLQLRTQQLGSFYILPC
VSDFIIDILLGSASGEIRRVACDQLYTLSQSDSSAFPEIVKPNVFLLRVVLASQLPLWSP
TSVMRGVNQRLLSQCTEYFDLRCQLLDDLTSSEMEVLSVSAVAMLEDEISWLDNFEPSWS
SEMETSEADNILQAGHLRLIKTLLSLCGTEKEQLGPSLIQQLLDDFLFRASRIILNTSNP
ASSSPPSHDFFPKCSTASSRLAAYEVLVMLADSSVANLQLITRELLSMHHQSDPSLSKEF
DFLPPVDSRSVSGFVGLKNGGATCYMNAVFQQLYMQPGLAEAFLSIEDDTEQPDESVFCQ
VQSLFGHLMESKLQYYVPENFWKIFKMWNKELYVREQQDAYEFFTSLVDQLDEHLKKIGR
EQIFKNTFQGIFSDQKICKDCPHRYEREETFMALNLGVTSCQSLEISLDQFVRGEVLEGT
NAYYCEKCKEKRTTVKRTCIKSLPSVLCIHLMRFGFDWESGRSIKYDEQIRFPWVLNMEP
YTVSGMARQDGGAEGGEGRGEAGGSPRKKVTISENYELVGVVVHSGQAHAGHYYSFIKDR
RGSARGRWYKFNDNVVEEFDMNDETLEYECFGGEYRPKVYDQSNPYPDVRRRYWNAYMLF
YQRISDQNSPVLPKKSRVSVMRQEAEDLTLSAPSSPDVSPQSSPRPARANNDRLSVLTRL
VRKGEKKGLFVEKMPCXIYQMVRDENLKFMKNRDVYNSDYFNFTLSLASVNATKLKHPAY
QAMARVSLQLAVHFLFHTYLHTKKKLRXDTEEWMXTVEVLLSKSSEACHWMAQYLVGPEG
REITKVCLLECGVREVRVVVAAILEKTLESALHFADSGLDSLTDALLSLLDKDVPENVKH
CNQYFSLFSNFAQRGSGPCHLLLKHSAYRRMLIFLLGPNRQNNQNRRWSPAQAREFLHLH
STLALMTLYSDLNTQHTHDQGVCKLIVSSIPASSRLLPLNADIMASLFSPEGQPYLLEVM
FAMRELSGPLTVLIEMVTYCSLCNEPFSLGVLQLLKTQLETAPPHELKNVFQLLQELLVV
EDALQTQRLKYAFESEKGLLALMHQSNNVDSSRCYQCVKFLVTLAQKCAPAKDYFKDLSG
HWSWAVQWLQKKMSEHYWTPQSNVSNETSTAKTFQRTISAQDTLAYATALLNEKEPSGSS
NGSDGSPANENADRSLRQGSESPMMLGDSKSDLEDVDP
NT seq
7857 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaagaggagcaacatatgacaactctcctctgcatgggtttcccagatgca
gtggcgatacgcaaggcgctacgcctggcgaagaacgacatcaacgaggctgtggcgctc
ctgaccaacgaaagccccggtcttgggtatggatatgagccgatggagagtggccctgcc
ccaggcccaagtggagacggggagtccagcgggcggactgggactggagggttcgaccca
cctcccgcataccacgatgtggtggagagcgagaggagtaatgatgagaatgggaattgt
tcaggcagcagtatggagttccccaccactaacctgtatgaactggagaacagagtgttc
actgaccactggtccatcccctacaagagagaggagtcactgggcaaatgtctggtcgca
gccacctgcctcgccaaacacggtctggcggatgcggatgaaaactgtaagcagtttatg
gacaggtgtatgcacgaggcctttaaaaagctcctgaccagtagtgcggtccataagtgg
ggaacagagatccatgaggggatctacaacatgttgatgttactggtggagctggtggct
gagagagtcaaacgggaccccatacctgttggcgtgatgggtgtactgactattgccttc
aacccagacaatgagtaccactttaagaaccgtatgaagacgtgtcagaggaactggagr
gaggtgtttggagaggaagccatgtttgctgtgtcacctagcaacagctaccaaaaggag
cctcatggctggctggtagacctggtcaatcggtttggagagatgggagggttcactgct
atccaggctaaactcaatacacaggagatagagattgggtgtgtgtctgctctggtccag
cctctatctgtgtgtgcagaatacctcaactccagcctggtgcagcccatgttggatcct
gttatccataagatgatcacctatgttcagaacctggaggagaaggacctgaaagacaag
aggctggtgagtatcccagaactgctgtcggccataaagctgctgtgtatgaggttccag
accaccctggtcactgtggtggacgacctgcgcctggacactctgctacgcatgctgaag
actcctcacttctctaccaagatgaactccctcaaagaggtgactaagctgattgaggag
agtactgtgtctaagacggtgaagaatgccattgacacagacagactgctggactggctg
gtggagaactctgtcctctcaatagcactggagggaaacatagaccaggcccagtattgt
gatcgaataaaaggcatcattgagttgctgggcagtaaactgtctctggacgagctctct
aagatctggatgatacaggcaggacagtcgtccacggtgattgagaacatccacaccatc
atggctgcagctgccgtcaagttcaacttagaccagctcagccacctgtttgtccttata
cagaagagctgggaggtagagagtgaccgtgtgaggcagaagctgttgagtctgattggg
aggatcggtagagaagcccggtctgaggccaccacagggaaggtgctggaggtgctgtgg
gagttagcccacctgcccatcctgcctacctccctggtacagcaggcgtctgaggaacac
ctggccatcctcactgacgcatatgctgtgaaggagactgtaaagcgctgctacatcatc
aaatgtatagaagacatcaagaagactcagactgaggagcagggtaaaaccagcgacatt
cagagctcgtttcttactggctcctggggcaagaagaaagccaaagaaaactcattggcc
aaatcttcacagcagggcagcccccaagcggtctgggtggttccagctctgcggcagctc
catgagatcacacgctccttcatcaaacagacctaccagaaacaggacaagagcatcatc
caggacttgaagaagaactttgagatcgtcaaattgatcacaggatctttggtggtctgt
catcgattggctgtgtctgcagctgggagcaatggactggccggatacacactggtagat
ggacgatacacctaccaggagtatctagacggccacctgaagttcctggccttcttcctc
caggaggccagcctctacctggtctggaacagagccaaagaactatgggactgcctggtc
tctgggcccgaagtctgcgagctggacagagagatgtgttttgagtggttcactaagggc
cagcatgatctggagagtgatgttcagcagcagctcttcaaagagaagatcctcaaattg
gagccctacgagattactatgaatggcttcaatctgttcaagaccttttttgagaatgtc
aacctgtgtgaccatcgcttgaaacgccaggggactcaactgtgtgtggagcggctggac
ctgtctgggatggactttatctggcgcatcgccatggaaacgcctgacgaggagatcgct
aacgaggccatccagctcatcatcacctacagctacaccaacctcaacccaaagatgaag
aaggattctgtgtctttacacaagaagttcattgctgattgttacaagcgactcgaggrg
gccagttcagctctaggaggccccacgttgactcatgctgttaccagggcaaccaagatg
ctgacggccaccgccatgccaactgttgctacgtcggtccaatcaccttccaggtccacc
aaactggtgatcattgagaggctgctgctattggctgagcgttacgtcatcactatcgag
gatctgtactctgtgcctcgtaccattctacctcacggagcytcgttcaacggccaccct
gtctctctacacgtcacctatgagtccaccaaagacaccttcaccctggaggcccacagt
aatgaaactgtaggcagcatccgctggaagatcgctgagcacctcagctgtccagtcgac
aatgtccaaatctttgccaatgatagcgtgttgacaatgaaccgggaccagaagctgctg
tcccagctggggttcagtgatgagcagtctctgacagtgaagagctctggcaccgggacg
ccctctggtggcagctcagagtcctccgcctccgcatcctcctctagctctgcggtcttc
aactccgcctacgctatggaacaggagaagtcccttccaggtgttgtcatggcgttggtg
tgcaacgtgtttgagatgctctaccagctggccaacctggacgaaccccggacaaccctg
cgtgtgcgtaagctgctgctgctgatcccaacagacccagaggttcaggatgctctagat
aactttgttcccaaagagtccagtgtctggagtcatcagaagacgctgttcaccctgggt
caggggtcaggctctcggtctccgtctctgggttctaagcagcagcaccagcccagtgct
gcctccatcttggaatcactcttcagatcctctgctcccgggatgtccaccttcagagtc
ctctacaacctagaggtgttgagttctaagttgatgccaacctcagatgatgagatggct
aagaccagtgtcaagtctttctgtgagaacttcctgaaagctggaggtctcagtttggtg
gtgaacgtgatgcagcgagactctattccctctgaggtggactatgagaccagacaggga
gtctattccatctgtctacaactggccaggttccttttggttggccagagtatgccgtcg
ttgctggatgatgatgtcatccgagagggcgacacgctgtctagtcggccgttccgtaac
gcggggcgaccggggaggcagctgtcgctgtgtggaacgccagagaagagctcctataga
cagatgtctctgtctgaacgctcctccatcagagtagaggagatcatccctgctgcacgc
gtagctatacagacgatggaggtgggggacttcacctcgacgttggcgtgcttcatgcgt
ctgacatgggcagcagccgctggccgattggacctcgtcggcagtccacagccaatcaga
cctgagcacagctcgctcctcccacttggggtccgcacccgtgtcagcagcactggaagt
aactgcagctccagcagtgagggcgaagcgccgcccacagctctgcatgctgggatatgc
gtgaagcagcagagtgtttctattaaagactgcatcatcgctagagaggccctgtcnnnn
nnnntcacctgtctacagctacgaacacagcagctaggctcattctacatcctcccctgt
gtcagcgacttcatcatcgacatcctgctaggatcagccagtggagagatccggcgcgtg
gcatgtgaccagctgtacactctgagccaatccgacagctctgcgttccctgagatcgtc
aaacccaacgtgttcctgctccgagtcgtcctcgcctcccagctgcctctctggagcccc
acgtctgtcatgagaggagtcaaccagaggttgctgtcacagtgtacagagtactttgac
ctgcgatgtcaactactggatgacttgaccagttcggagatggaggtgttgtcagtgagt
gccgtggccatgttggaagatgagatcagctggttggataactttgagcccagctggagc
tctgagatggagaccagtgaggctgacaacatcctgcaggctggacacctccgcctcatc
aaaacactactgtcactctgtggcacagagaaggaacaactgggtccctctctgatccag
cagctgttagatgacttcctcttccgagcatcccgcatcatcctgaacacgtctaacccc
gcctccagctccccccccagccacgacttcttccccaagtgcagtacggccagcagtaga
ctggcagcctacgaggtgctggtgatgctggcagacagctctgtggccaacctacagctc
atcaccagagaactgctgtccatgcaccaccagtcagacccctcgctcagcaaggagttt
gacttcctcccgccggtggacagtcgctctgtgtcggggttcgtagggttaaagaacggt
ggagccacctgctatatgaatgctgttttccagcagctgtacatgcagcctggcctggct
gaggcctttctgtctatagaggacgacacggagcagccagacgagagtgttttctgtcag
gtccagtctctgttcggacacctgatggagagcaagctgcagtactacgtccctgagaac
ttctggaagatctttaagatgtggaataaggagctgtatgtacgggagcagcaggatgcc
tatgagttcttcacttcactggtggaccagttggacgagcacctcaagaaaatcggccgt
gagcagatcttcaagaatactttccagggaatcttctctgatcagaagatctgcaaagac
tgccctcaccggtatgagcgagaggagacgtttatggcgctgaacctgggtgtgacttcc
tgtcagagtctggagatctcattggaccagtttgtcaggggggaggtgctagaaggaacc
aacgcctactactgcgaaaagtgcaaggagaagcgtaccacagtgaagcggacctgcata
aagtccctacccagtgttctctgtatccatctgatgcgcttcggtttcgactgggagagc
ggacgctccatcaaatacgacgagcagatcaggtttccctgggtgctgaacatggagccc
tacacagtgtctggcatggctcgtcaggatgggggggcggaggggggagagggccggggg
gaggcaggtggctcacccaggaagaaggtcactatctctgagaactacgagctggtggga
gtcgtagtccacagcggacaggcacacgctggacattactactccttcataaaggaccga
cggggaagtgctagaggaaggtggtataagtttaatgacaatgtggtcgaggagtttgac
atgaacgatgagacactggaatacgagtgctttggaggagagtaccggcctaaagtctac
gatcagtctaacccctacccggatgtgcggcggcggtattggaacgcctacatgttgttc
taccagaggatcagtgaccagaactctcctgttctccctaagaagagcagagtcagcgtc
atgaggcaagaggcagaagacctcacgctttcggcgccctctagcccagacgtcagtccc
cagtcgtcccctcgccctgccagggccaacaatgaccgtctctctgtcctgacccgcctc
gtacggaagggagagaagaaaggactgtttgtggagaagatgccctgcntgatctaccag
atggtgagagatgagaacctgaagtttatgaagaacagagatgtgtacaacagcgactac
ttcaacttcactctgtcactggcctccgtcaacgcgacaaagctgaagcacccagcctat
caggccatggccagagtcagtctccagctagcagtccacttcctgttccacacctacctc
cacaccaaaaagaagctgcggntggacacagaggagtggatgnacacggtggaggtgctg
ctgtctaaaagcagtgaagcctgtcactggatggctcagtacctggtgggacctgaggga
cgagagatcaccaaagtgtgtctgttggagtgtggggtgagggaggtgagggtcgtagtg
gcagccatcttggagaagaccttagagagtgcgctccacttcgctgactctggattagac
agcctgaccgacgcgctcctctccctattggacaaagacgttcctgagaacgtcaaacac
tgcaaccaatacttcagcctcttcagcaactttgctcagagaggctctggtccgtgccat
ttgttgttgaaacactcagcgtatcgcaggatgctcatctttctcctcggacccaacaga
cagaacaaccagaatcggaggtggagtccagcccaggccagagagttcctgcacctccac
tccactctggccctgatgactctctactcagacctcaacacacagcacacacatgatcaa
ggtgtgtgtaagctgattgtgagcagtatccctgcctcctcccgcctcctccccctcaac
gctgacatcatggcctcgctcttcagccccgagggacagccttacctgctagaggtgatg
tttgcgatgcgggagttgtcaggccctctgactgtgctgatagagatggtgacgtactgc
tccttrtgtaacgaacccttctccctcggagtactacagctgctcaagacccagttggag
accgctccaccccatgagttgaagaacgtgttccagctgctgcaagagctgctggtggta
gaggacgctctccagacccagagactgaagtacgcctttgagtcagagaaaggcctgcta
gcattgatgcaccagagtaacaacgtggacagcagccgctgctaccagtgtgtcaagttc
ctggttaccctggcacagaagtgtgctcctgctaaggactattttaaagatctgtctggt
cactggagctgggcagtgcagtggttgcagaaaaagatgtcagaacactactggactcct
cagagcaacgtgtccaatgagacgtctacagccaaaacgttccagcgcaccatctcagcc
caggacacgctggcctacgccacagcactgctcaacgagaaggagccatctggcagcagc
aacggctctgacggcagcccagccaacgagaacgcagaccgcagcctccgacagggttcc
gagtctcccatgatgctcggtgattcaaagagtgatctggaggatgtcgacccttag
DBGET
integrated database retrieval system
