Salvelinus sp. IW2-2015 (Arctic char): 111972313
Help
Entry
111972313 CDS
T05762
Symbol
fip1l1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111972313 (fip1l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111972313 (fip1l1)
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111972313 (fip1l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
111972313
NCBI-ProteinID:
XP_023855071
LinkDB
All DBs
Position
LG13:22414874..22465507
Genome browser
AA seq
514 aa
AA seq
DB search
MSAEMDKATDASGGDEDEWLYGDESEEKAEEEAPNSAKAQPTAEEVHENGVVKQDTGQED
EESDSDSEDDDDVCVTIGDIKTGGSSQPFNAFGSTPVNLNIKAAGRTHASVGPKAKGVDL
DALGSVNGIPVLEVDIESFEEKPWRKPGSDLSDYFNYGFNEDTWKTYCEKQRRLRMGYEG
MNHASATKIMVHQGRSAHGDRDGALSCFRSDYSSPSNHYNSGSSSRKPSGTIDVIGGQTG
TISRVEGRRRHNIEGNNIQVLSEPPSDAEPTPTKMPPFFPPNIPPPPFPPPPHNVSSAPP
LIPPPRIPINVPPPGYPPGAPPPSLIPTLDSGRSGGYDGRSAPPYPPFPPGVYPPPPPGS
AAASWAGVFDSAKAWEYYAQRDNERERHKERDRPRERGHEKEREREREHNPSSQVVNSEE
DRHRHRDYGERGYDRHHHERSSREKEERHREKRHRDKEEGRHKSSSSSSRRRHESEEGDS
HRRHKHKKVKRSREDKEPSQELSADQENQSEPTE
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaaatggacaaagcaactgacgcaagcgggggcgatgaagacgaatggtta
tatggagatgagagtgaggagaaagcagaggaagaggcacctaatagtgcaaaggcccag
ccgactgctgaggaggtccatgagaatggagtagtgaagcaggatacaggccaggaagat
gaagaaagtgacagtgacagtgaggatgatgatgacgtgtgtgtaaccattggcgatata
aagaccggaggctcatctcagcctttcaatgcttttggatccacaccagttaatctcaac
attaaggctgcagggagaacacatgcgtcagttggccccaaagccaaaggagtggacctg
gatgcactgggcagtgttaacggaatccctgtgttggaggtcgacatagagtcttttgaa
gaaaagccgtggagaaagcctggttcggacctctcggactactttaactatggctttaac
gaggacacctggaagacctactgtgagaaacagaggagactacgcatggggtatgagggc
atgaaccacgcttcagccactaaaatcatggtccaccagggacgttcagcccatggtgat
agggatggggccctttcctgctttaggtctgactattcctcccccagcaaccactacaat
tcaggctcctccagtagaaagccaagcggcaccattgatgttattgggggacaaactggt
accatcagccgggtagagggacgaagacgtcacaatatagaaggaaataacatccaggtg
ctttctgagcccccctctgatgctgagcctactcccactaagatgccccccttttttcct
cccaacatccccccgcctcctttcccgcctccaccccacaatgtcagctccgcccctcca
ctcattcctccaccacggatccccatcaatgttcctccacctggctaccctcctggcgca
ccaccaccttctctgattcctaccttagacagtggacgctctggaggctatgatggtcgc
tcagctccaccgtacccccccttccctccaggtgtgtaccctcctcctcccccgggtagc
gcagcagcctcctgggccggggtattcgacagtgccaaggcctgggagtactacgcgcag
cgggacaacgagcgagagcgccacaaggaaagagacagacccagagaacgcggacacgag
aaagaaagagagagggagagagagcacaacccttcctcccaggtcgtcaacagtgaggag
gatcggcaccggcacagggactatggggagagaggatatgaccgccaccaccacgagaga
tccagcagagagaaagaagagagacaccgagagaagagacacagagacaaagaggagggg
agacacaagtcctcaagcagtagcagcaggaggagacatgagagtgaggagggggacagt
catcgaagacacaaacacaagaaggtcaagaggagcagagaggacaaggagcccagccag
gaactctctgctgaccaggagaaccaatcagagcccacagagtga
DBGET
integrated database retrieval system
