Salvelinus sp. IW2-2015 (Arctic char): 111972317
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Entry
111972317 CDS
T05762
Symbol
kit
Name
(RefSeq) LOW QUALITY PROTEIN: mast/stem cell growth factor receptor Kit
KO
K05091
proto-oncogene tyrosine-protein kinase Kit [EC:
2.7.10.1
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111972317 (kit)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
111972317 (kit)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
salp01001
]
111972317 (kit)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
salp04090
]
111972317 (kit)
Enzymes [BR:
salp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
111972317 (kit)
Protein kinases [BR:
salp01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
111972317 (kit)
CD molecules [BR:
salp04090
]
Proteins
111972317 (kit)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
C2-set_2
Motif
Other DBs
NCBI-GeneID:
111972317
NCBI-ProteinID:
XP_023855079
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All DBs
Position
LG13:22805354..22843002
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AA seq
992 aa
AA seq
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MEYHWVLFSVLLQLTFQTGSSRPTITPSNPYLVIPLNAPFSLRCQGDQVMRWQREDRPKL
RGEVRSNGASDLEIPKAQPVHMGRYICLEESSGEQSSVYVFVKDPDNAFRKTMVFSILTR
AGDSASIPCLATDPGVVNLSLEPCHGGALPTGLHYVASLERGMVIFDTKKAFEGCYICTG
RLGGAHVKSHHYDLTVRPVPDAAPVIEMREPKRVILTRGQTLTLTCSTTNVNGDIKLKWA
APPGTQPAVENASRILTEPIKHVRSARLYINSVRARDSGRYRCEGQNEKGINSESIWLDV
YDRGFINLTPSDNGTVHVRAGESLSLHVDMEAYPKPHTFTWSFSGQQLRNTSDHVITTQN
HQHRYNIVLRLVRLKMSESGVYTFXASNGDATVNQSFSVYVISKPEIVSHEGPVDGQVRC
VAKGYPAPQITWYYCEQPYMRCSHQMNATQEEQDIVTVTLLSPSFGKTEVESRLNITTGR
FHTLECVATVEGEQAYTLFSISERTVPHELFTPLLIGFVSAAVLLCVILVVLFYKYLQKP
KYQIQWKVIEGIHGNNYVYIDPTQLPYDHQWEFPRDKLRFGKTLGSGAFGKVVEATAYGM
SKADTVMTVAVKMLKPSAHATEKEALMSELKVLSYLGNHMNIVNLLGACTVGGPTLVITE
YCCFGDLLNFLRRKRETFFCSKLGDDCYYRNVMLQRGTATAGDSRNGYVDMRPSVTGVLP
NGFSSEERRSMRKAGGSSSEPDVVSEMLHEDGLSLDTEDLLSFSYQVAKGMDFLASKNXI
HRDLAARNILLTQGRVAKICDFGLARDITTDSNYVVKGNARLPVKWMSPESIFECVYTFE
SDVWSYGILLWEIFSLGSSPYPGIPVDSKFYKMIKEGYRMDAPEFAPSEMYEIMRSCWEA
DPFKRPSFSKVVERIEQQLSDTTKHIYLNFSSKFPVTMGPQGTNVDQGTQNANVLRLNSV
GSSNASTQPLLASASDDVFLEEMSTRLRVHRV
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggaataccactgggtactgttttctgtcttgttgcagttaaccttccaaacaggcagc
tccaggcccaccatcacccccagcaacccctacctggtcattccactcaatgcccccttc
agtctgcgttgccagggtgaccaggtgatgcggtggcagagggaggaccgtccaaagctg
aggggcgaggtgcggagtaatggggcgtccgacctggaaatccccaaagctcagcctgtc
cacatgggccgatacatctgcctggaggagagcagcggagagcagagctctgtctacgtc
tttgtcaaagatcctgataatgcctttagaaagactatggtgttcagtatcctaactcgt
gcgggagacagcgcctccatcccctgcctagcaactgacccgggcgtggtcaacctgagc
ctggagccgtgtcatggcggtgccctccctactggcctccactatgttgccagcctggag
cggggcatggttatcttcgacactaagaaggccttcgagggctgttatatctgcactggc
agacttggcggcgcccacgttaaatcacatcactatgatctgactgtgcgcccagtccca
gacgccgcccctgtgattgagatgcgggaacccaagagggtgatcctgacacggggccag
actcttaccttgacctgcagcaccaccaacgtcaacggagacatcaagctgaagtgggcc
gcaccgcccggcacgcaaccggcggtggagaacgcctcacgcatcctgactgagcccatc
aaacacgtccgtagcgctaggctctacatcaactctgtcagggcacgggattctgggaga
tatcgatgtgagggtcagaatgagaaggggatcaactctgagtcaatctggctggacgtc
tatgatagaggattcattaatctgactccgtcagacaacggtacagtgcatgttcgtgct
ggtgagagtctgtccctgcatgtggacatggaagcctaccccaaaccacacaccttcacc
tggagcttctcaggccagcagctcaggaacacctccgaccatgtcatcaccacacagaac
caccaacacaggtacaacattgtgctgaggctggtgcgtttgaaaatgtcagagagtgga
gtctacacttttnatgcctccaatggtgacgcaacagtcaatcagtcgttttcggtctac
gtaatcagtaaaccagagattgtatctcacgagggcccggtggacggacaggtgcgatgt
gtagctaagggataccccgccccacagatcacctggtactactgtgaacagccctatatg
aggtgctcccaccagatgaacgccactcaggaggagcaggacattgtcacggtgacattg
ttgagtccctcctttgggaagacggaggtggagagcaggctgaacatcaccacgggaaga
ttccacacgttggagtgtgtggccaccgtggagggagagcaggcctacacactgttctct
atcagtgagagaacagtgccccatgagctcttcacccctctgctgattggctttgtgtca
gcagcggtcctcctctgtgtcatcctcgtagtgctcttctacaagtacctgcagaaaccc
aaataccagatccagtggaaagtcattgaaggtatccacggaaacaactatgtgtatatt
gaccctacccagctcccatacgaccaccagtgggagttcccccgggacaaactgcgtttc
gggaaaactctgggctccggagccttcgggaaggtggtggaggctactgcttatggaatg
tccaaagctgatacagtgatgacagtggcggtcaaaatgctcaaacccagtgcccatgcc
actgagaaggaggcgctgatgtcagagctgaaagttctcagttaccttggaaaccacatg
aacatcgtcaacctgcttggagcctgtactgttggaggcccaaccctggtgatcacagag
tactgctgctttggtgacctcctgaactttctgagaaggaagagagagacgttcttttgc
tccaagctaggggacgactgctactacaggaatgtcatgctgcagaggggaacagctaca
gctggagacagcaggaatggctatgtggatatgaggccttctgtcactggcgtcctgcca
aatggcttctcctcagaggagaggcgctcgatgcgcaaagcaggtggttccagtagtgag
ccagatgttgtgagtgagatgctccatgaggacggtctctctctggacacagaggatctg
ctcagcttctcctatcaagtggccaaaggcatggacttcctggcttccaaaaatnnnatc
cacagagacctggcagccaggaacattctcctgacccagggacgagtggcaaagatctgt
gacttcggccttgctcgtgacatcaccactgactccaattatgtagtcaaaggcaatgct
cgtctcccagtcaagtggatgtctccggagagcatctttgagtgtgtgtacacatttgag
agtgacgtgtggtcctatggcatcttgctctgggaaatcttctcactcggaagcagtcca
tatcctgggatacctgtggactcaaagttctacaaaatgattaaggaaggatacagaatg
gatgcaccagagtttgcaccgagtgaaatgtatgagataatgaggtcgtgctgggaagcg
gacccctttaagagaccctccttcagcaaggtggtggagaggatcgaacaacagctgtca
gacaccaccaaacatatctatctgaatttcagctccaagtttccggttacaatggggccc
cagggtaccaatgtggaccaggggacacagaacgccaacgtcctgcgtctcaactcggtg
ggcagcagcaatgcctccactcagcccctattggccagcgccagcgatgacgtcttcctg
gaggagatgagcaccaggctcagggtccaccgggtgtaa
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