Salvelinus sp. IW2-2015 (Arctic char): 111972352
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Entry
111972352 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: macrophage receptor MARCO-like
KO
K13884
macrophage receptor with collagenous structure
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111972352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111972352
Membrane trafficking [BR:
salp04131
]
Endocytosis
Phagocytosis
Scavenger receptors
111972352
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
Collagen
SRCR_2
Motif
Other DBs
NCBI-GeneID:
111972352
NCBI-ProteinID:
XP_023855145
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Position
LG2:33130567..33146384
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AA seq
389 aa
AA seq
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METSVDRGEGHISSFCQSNPLYDMDMKLSRSDLYTFQSSDLKPAKARGAQQCLNVIVVYL
ILLTALNALLLYKGTTKXSQLGQLRTNLGAVNASTTLLQDSVKAFRLLKASPGPQGPTGP
PGARGLPGVRVDKRDRGQTGQKGDPGVDGQTGAKGEAGEPGLEGEDGTTVQQGPAGTPGG
AATNCSGAPGLPGPQGPKGDMGHIGLPGIPGQNGIKGHTGAQGRDGVQGAPDLKGDTGPT
GLPGPIGPEGPRGPAGVSGTRGLVGFPGLPGSPGPLGPRGEKGERAAGSVTANVRIAGGG
TRGRVEVMWSGQWGTVCDDGFDILDGTVICKMLGYQRASTVFTASHGIGRIWLDDLRCTG
REASVFDCPHNGXGISNCQHNEDAGVQCV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggagacatcagtagacagaggagagggccacatcagctcgttctgccagagtaaccca
ctttatgacatggacatgaaactgagcaggagtgacctgtacaccttccagagcagtgat
ctaaaaccagccaaggcccgaggagcacagcaatgtctaaatgttattgtcgtttacctc
atccttctgactgcactgaatgccttactcctttacaaaggtacaacaaagnccagccag
ctgggccagctgagaacgaacctgggtgcggtcaacgccagcaccactctccttcaggac
tcagtgaaagcattcagattactcaaagcttcaccaggcccacagggacctactggtcca
cctggtgcgagggggttacctggtgtgagggtggacaagagagacaggggtcagacagga
caaaaaggagaccctggagttgatggccagactggagccaagggagaagcaggggaacca
ggactcgaaggtgaagatggtaccactgtacaacaaggaccagctggaacaccaggcggt
gcagctactaactgttcaggagcccctgggctgccaggaccacagggaccaaagggggat
atgggacacattggtttaccagggataccaggccagaatgggatcaaagggcacactgga
gcccaggggcgtgatggagtacagggggcccctgatttgaagggtgacacagggccgaca
ggactacctggacccataggacctgaaggaccaagaggacctgctggtgttagtggaaca
agaggacttgtgggatttccagggttgccgggaagtcccggaccactaggtccacgtgga
gagaagggtgaaagagcagctggatcagtgacagcaaatgtgcgtatcgctggcgggggg
actcgtgggagagtggaggtgatgtggtcggggcagtggggtacggtgtgtgacgacggc
ttcgacattctggacgggaccgtgatctgcaagatgctggggtaccaacgagcctccaca
gtcttcacagccagccatggaatcggtaggatctggttggatgacctgcgatgcacaggc
agagaggccagtgtgtttgactgcccccacaacggcatrggcatcagcaactgtcaacac
aacgaggacgctggggtgcagtgtgtgtga
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