Salvelinus sp. IW2-2015 (Arctic char): 111972393
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Entry
111972393 CDS
T05762
Name
(RefSeq) cadherin-2-like
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111972393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111972393
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111972393
04090 CD molecules [BR:
salp04090
]
111972393
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
111972393
Cell adhesion molecules [BR:
salp04515
]
Cadherins
Major cadherins
111972393
CD molecules [BR:
salp04090
]
Proteins
111972393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
DUF2304
Cytomega_TRL10
DUF3139
Stevor
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
111972393
NCBI-ProteinID:
XP_023855209
LinkDB
All DBs
Position
LG13:complement(28314510..28394036)
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AA seq
925 aa
AA seq
DB search
MFRTFVALLMLLAAVQTAVQGGGAVGSSPWRQGSLPCTRGFSQEEYSVAVDEELREGQAL
LTVRFADCGLGDRVLLEVVDVEDFRLDEDGTVYARHAFRLADRKSALVVRARDLETKEDW
KTHVYLLLRNDGKRETTEHKLIKQVNSSSAAVTQQAREILFPWHSLVIGDDGSLRRVKRD
WVIPPINVPENSRGQFPEELVRIRSDRDKNSLLRYSVTGPGADQSPTGIFIINPISGQLS
VTKPLDREQISNFHLRAHAVDLNGNQIENPIDIVINVIDMNDNRPEFTHTIYNGSVPEGS
KPGSFVMTVTSLDKDDPKTANGMLRYKIISQNPENPSSNMFTINNKTGGIITVAAGLDRE
KVPQYTLIIQATDMEGNPTYGLSNTATAIIRITDVNDNPPEFTADKFYGEVQENRVNVIV
ANLTVTDKDQPHSAAWSTVYRITAGDPTGRFSIPTDLTTNEGLVTVVKPIDYEVSRSFVL
TVLAENEVSLARGIHLPRQSTATVSVRITDVNESPEFSPNPKVIKLEEGLPGGSLLTTFT
AQDPDRYMQQNIRYAKVFDPANWLKIDPVNGRISTIAVLDRESPYVKNNLYNITFMATDN
GIPPASGTGTLQMYLLDINDNAPRVFPPEVEMCEKPEPNTINITASDPDLTPNAGPFAFE
LAKRPADARRNWTLTRLNGEYAQIRLRIGFLESGIYEVPIIITDSGNLPMSNTSYLQVKV
CQCDHHGDCVDMERIIAAGLGTGAIIAILICIIILLVMVLFFVMWMKRRDKERQAKQLLI
DPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDALETEMVKVGIRRMDERPLHQDHLYP
LRSAAPHPGDIGDFIHEGLKAADNDPTAPPYDSLLVFDYEGSGSTAGSLSSLHSSSSGGD
QDYDYLSDWGPRFRKLADLYGGEDN
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgaacctttgtcgcgctgctgatgctactggcagctgtgcagactgctgtgcag
ggtggaggggccgtggggtcatcaccatggaggcaggggtcgttgccgtgcacacgaggc
ttctcccaggaggagtacagtgttgctgtggacgaggagctaagagagggacaagcactc
ctcaccgtgaggttcgcagactgtggcctgggtgacagggtgctgttggaggtggttgac
gtggaggacttcaggctggatgaggatggcacggtgtacgcccggcatgccttccgtctt
gccgacaggaagagcgccttggtggtgcgagcgagggatctggagaccaaggaggattgg
aagacgcatgtttacctcctcctccggaacgacggaaagcgagagacgacagaacacaaa
ctcatcaaacaggtgaactccagctctgcagctgtgactcagcaggcgcgagagatcttg
tttccatggcacagcttggtcattggggacgatggatctctgaggcgggtgaagagggac
tgggtcattccccccatcaacgtccctgagaactcacgaggacagttccccgaggagcta
gtcaggatccggtcggaccgtgataagaacagtctcctgcgttacagtgtgactggaccc
ggtgctgaccagtctccgaccgggatcttcatcatcaaccccatctctggccagctctct
gtgaccaaacccctcgaccgggaacagatctccaacttccatctgcgagcccatgctgtg
gacctgaatgggaaccagatagagaaccccatagacatcgtcatcaacgtcatagacatg
aatgacaacagaccagagtttacacacaccatctacaacggatcagtaccagagggatcc
aaaccagggtcctttgtgatgacagttacttcactggacaaggatgacccgaaaacagcc
aatgggatgctccgatacaagattatatctcagaaccctgaaaacccctcctccaacatg
ttcaccatcaacaacaagacaggaggaatcatcactgtggctgcagggctagacagagag
aaagttcctcagtacacgttaatcatccaggctactgacatggaggggaacccaacctat
ggcctgtctaacacagctacggctatcatcaggatcactgacgtcaatgataacccccca
gagttcaccgctgacaaattctatggagaggtgcaggagaaccgtgtgaatgtgatcgta
gctaatctgacagtaacagataaggaccagccccacagtgcagcctggagtactgtgtac
aggatcacagctggagaccccactggacgcttctccatccccactgacctcaccaccaat
gagggactggtcactgtggttaagcctatagactatgaggtgagtcgttccttcgtgctg
acggtactggctgagaacgaggtttccctggcccgtggtatccacctgccccgtcagtcc
accgccaccgtgtctgtacgcatcacagacgtcaacgagagcccagagttctcccccaac
cccaaagtcatcaaactagaggaggggctaccgggcggctcgctactcaccacctttaca
gcacaggaccctgacagatacatgcaacagaacatacggtacgccaaggtgttcgaccct
gctaattggctgaagatagaccctgtaaacgggcggatctccaccatcgctgtgctggac
agagagtctccatatgtgaagaataacctctacaacatcaccttcatggccactgacaat
ggcatccccccagccagtggtacaggtacattacagatgtacctgttggacataaatgac
aatgctcctcgtgtcttccctccggaggtggagatgtgtgagaagcctgagcccaacacc
atcaacatcaccgccagtgaccccgatctgacccctaacgccggcccctttgccttcgaa
ctggccaagcgtccggcagatgcacgcaggaactggaccctcacacgcctcaatggtgaa
tatgctcagatcaggctgcggataggttttctggagagtggtatctacgaggttcctatc
atcatcacagactcaggcaacctgcccatgtccaatacatcctacctgcaggtcaaggtg
tgtcagtgtgatcaccatggagattgtgtggacatggaacgcatcatcgcagcagggctg
ggcactggagccatcatcgctatcctcatctgtatcatcatactgctagtgatggtgttg
ttctttgtgatgtggatgaagaggagggataaggaacgtcaggccaagcagctgctcatc
gacccagaggacgatgtcagagacaacatactgaagtacgacgaagaaggaggaggagag
gaggaccaggactatgacctgagccagctgcagcagcccgacgcgttggagacagaaatg
gtgaaggtggggatccgacgtatggatgagaggcccctacaccaggaccacctgtacccc
ctccgttctgctgcaccccaccccggagatataggagacttcatccacgagggtctgaag
gcagctgataatgacccgacagcgcctccctacgacagtcttctggtgtttgactatgaa
ggcagtggctccaccgctggctccctcagctcccttcactcctcctcttccggcggagac
caggactacgactacctcagcgactggggcccacgcttccgcaagctggcagacctctat
ggtggagaggacaactag
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