Salvelinus sp. IW2-2015 (Arctic char): 111972404
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Entry
111972404 CDS
T05762
Name
(RefSeq) NF-kappa-B inhibitor epsilon
KO
K05872
NF-kappa-B inhibitor epsilon
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
111972404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111972404
Transcription factors [BR:
salp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
111972404
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Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_5
Ank_4
ARMT1-like_dom
Motif
Other DBs
NCBI-GeneID:
111972404
NCBI-ProteinID:
XP_023855219
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Position
LG13:complement(28692118..28701004)
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AA seq
352 aa
AA seq
DB search
MASAEDANGKVNLLEDNRIDSGVESLQYFTKYDPYNKTVRDSTSESSEAMDKCSSNTEER
LDSAYGSSSLTVENFSEIIEGCNISESGDDSAKNTEFEQKENLLTNITEDGDTLLHLAII
HEDEHFAHQLIQLFPXDVLDIQNNLYQTPLHLATYLNLSSVVRVLVESGASLDLQDQEGN
TPLHMACEQGWAECATEMIRNVSSSKLAPVLESQNWRGLTSLHLATVNRQHRLMKLLMTK
GADLNIQEGTSGKTPLHLAVELHDIVSMTLLLNKGADVDVPMFNGCTPLHLAVARQDAAI
ANLLCQSGADKMLRNIEDETALDLAGGNDDILALFPFDDIQIQGRSVVRVPF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcgctgaagatgcgaatgggaaagtgaatttattggaggataaccgaatagac
tctggtgttgaatcattacaatattttacgaaatatgatccctataacaaaacggtacgg
gattcgacttctgaatccagtgaagccatggacaaatgtagcagcaacacagaggagcgg
ttggattctgcttatggctcgtcgtcactaactgttgagaatttcagtgagataatagag
ggctgcaacatttcggagtctggagatgacagtgcgaagaatacagaatttgaacagaaa
gagaaccttctcaccaacatcactgaagatggagacacactcctgcatttagccatcatc
catgaagatgaacacttcgctcaccaattgatacagctgttccccaragatgtcttagac
attcagaacaacttgtaccagacgccgctacacctagccacctacctgaacctttcgtcg
gtggtgcgggtcctggtggagagcggggccagcctggatctgcaggaccaggaggggaac
acgccgctccacatggcctgcgaacagggctgggccgagtgcgctactgagatgatccgg
aatgtctcctccagcaagctggcccctgtgctcgagtcccagaactggagaggtctcacc
tctctccacctagccactgtgaacaggcaacatcgtctgatgaagctactgatgacaaaa
ggggcagacctcaacatccaggaaggtacgagcggtaaaacacctctccatctggcagtg
gagctccatgacattgtctctatgacgctgctattgaacaagggagccgatgtggacgtg
ccgatgtttaacggctgcacgccacttcacctcgccgttgcccggcaggacgcagccatc
gccaacctgctctgccaatccggggctgataagatgctgaggaacatagaggatgagacg
gcactggatctagctggcggcaatgatgatatccttgctcttttcccttttgatgacatc
caaatccagggcaggtcagtggttagagtaccattctga
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