Salvelinus sp. IW2-2015 (Arctic char): 111972591
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Entry
111972591 CDS
T05762
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
salp04990
]
111972591
Domain-containing proteins not elsewhere classified [BR:
salp04990
]
Other domain-containing proteins
Patched domain-containing proteins
111972591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
111972591
NCBI-ProteinID:
XP_023855376
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All DBs
Position
LG14:10070964..10097124
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AA seq
920 aa
AA seq
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MCFIGRNGASASWIWRRMLRQMIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTV
LSRFKPETDLEILVAPTHSFAKVERSLANSLFPIDQSKNKLYSDLHTPGRYGRLILLAKS
GGNILELADQVLQVHKQVLDLSVNYKGFNYTFAHLCVLSHQDKRCILDDIITIFEDIRLA
ILSNYTFSKVPVSYPNTTLKDGRVSFIGHQLGGVAFSPNSRDQQVKFARAVQITYYLRNH
GPVVQDVIAEKWENAFCALITRLSTLSEDLHIQSLTSFSLWRDFHQTGVLAKGEVLVSMV
LLLLAATISSSMRDCLRGKPFLGLLGVLTIAIANVTAAGIFFISDGKFNSTLLGIPFFSM
GHGTKGVFELLAGWRRTRESLPFKERVADAFADVMVCYTMTSSLYIITFGMGASPFTNIE
SVKIFCQSMCVAVLVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDRQPTWF
KTMMSDGHDHVTHHEVLPYHNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASFSFMGC
LQISDGSNIVNLLASNTPSVSYATTQQKYFSNYSPVIGFYIYEPIEYWNSTVQEHLTTLS
HGFNKISWMDNYFQYLKVVNVSASTKSDFITILQGSFLRSPEYQHFMEDIILSKTDGDEM
EIIASRMYLVARTTEKTREEVVELLERLRPLSLINNIKFIVFNPTFVFMDRYSSSVVSPI
LTSAFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVHMDSISILCLIYT
LNFAMDHCAPHLYTFVLATEHTRTQCIKISLEEHGAAILQNACCFVIGMLPLVFVPSNLT
YTLFKCSLLTAGCTVLHCFVILPVFLTFFPPSKKRHKKKKRAKRKEREREREMMERERVR
EREEIECIEVRENPDHVTNV
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcataggaagaaacggggcatctgcaagctggatctggaggaggatgctgcgg
caaatgatacacagagggctcaaagcttctttctactggctgggcttatttgttagtagg
catccggtttttttcctcaccgttcccgcagtcttaaccatcattttcggatctacagtg
ctgagcagattcaagcccgaaacggacctcgagatactggttgccccgacccacagcttt
gctaaagtagagcggagtcttgcgaacagccttttccccatcgaccagtcaaaaaacaag
ctctattccgacctgcacacccccggcagatatggcagactgattctactggctaagtct
gggggaaatatattggagctagccgaccaggtcctgcaggttcacaagcaggtgttggat
ttgagtgttaattacaagggattcaattacactttcgctcatctctgtgtcctgagccat
caggataagcgatgcatcttggatgatataattacgatattcgaagatatccgtttagct
attctgtcgaattatactttctcgaaggtgcccgtgagctatccaaatacaaccttaaag
gacggtcgtgtgtctttcatcggccaccagctgggtggagtggccttctcgcccaacagc
cgagaccagcaggtgaagtttgcccgggccgtccagatcacctactacctccgcaatcat
ggccccgtggttcaggacgtcatcgcagagaaatgggagaacgccttctgcgccctcatc
acgcgcctgtccacgctcagcgaggacctgcacatccagtctctcacctccttcagcctg
tggagggatttccaccagacgggcgtgctggctaaaggggaggtgctggtcagcatggtg
ctcctcctgctggcagccaccatttccagctccatgagggactgcctgagggggaagccc
ttcctgggtctactgggtgtgctcaccatagccatcgccaacgtgactgcagctggcatc
ttcttcatctccgacgggaagtttaactccacgctgctggggatccccttcttttccatg
ggtcatggaaccaaaggagtgtttgagctcctggcgggctggagaagaactcgagagagc
cttcccttcaaggagcgcgtggcagacgccttcgccgacgtgatggtgtgctataccatg
accagttccctctacatcatcacctttggcatgggtgccagccccttcaccaacatcgag
tcggtgaagatcttctgccagagcatgtgcgtggccgtcctggtcaactacttctacgtg
ttctccttctacggttcctgcttggtgtttgctggtcagctcgagcagaaccgctaccac
agtgtgttctgctgtaagatcccctcagtggagtacctggaccgccagcccacctggttc
aagaccatgatgagcgacggccatgaccacgtcactcatcacgaggtcttgccctaccac
aaccacttcatccagcacttcctgagggagcactacacggagtggatcaccaacacctac
gtcaagcccttcgtggtcatcctctacctgatctacgcctccttctccttcatgggatgt
ttacaaatcagtgatggatccaacatcgtcaacctcctagccagcaacacgcccagtgtg
tcctacgccacaacccagcagaagtacttcagtaactacagccccgtgatcggcttctac
atctatgaacccatcgagtactggaactccacggtgcaggagcacctcacaacgctgagc
catggcttcaacaagatctcctggatggataactactttcagtatctgaaggtggtgaat
gtgagcgcctcgaccaaaagtgatttcatcaccatcctgcagggctccttcctgcgcagc
ccagagtatcagcacttcatggaggacatcattctgtccaagacagatggggatgaaatg
gagatcatcgcttccaggatgtacctggtggcacggaccacggagaagaccagggaggaa
gtggtggagctgctggagaggctccgcccactctcgctcatcaacaacatcaagttcatc
gtcttcaaccccaccttcgtcttcatggaccgttacagttcctccgtagtgtcgcccatc
ctcacctcagctttcagtgtgctcaccatcctcatcctcaccttcttcctagtcataaac
cctctggggaacttctggttgatcctgaccgtcacctctgtagagctgggggtcctgggc
ctcatgaccctctggaatgtacacatggacagcatctctatcctgtgccttatttatact
ctaaactttgccatggatcactgtgcaccccacttgtataccttcgtactggccacggag
cacaccaggacccagtgcattaagatctcgctggaggagcacggggcggccattttgcaa
aacgcctgctgtttcgttatcgggatgttgcccttggtgtttgtgccttccaatctgacc
tacacgctgttcaagtgctccctcctcaccgcaggctgcacagtgctgcactgtttcgtt
atcctgcctgtgtttctaacgtttttccccccatccaaaaaaaggcacaagaagaagaaa
cgggccaaacggaaagagagagagagggagcgggagatgatggagagggagagagtgagg
gaaagggaggagatagagtgcattgaagtcagggagaaccctgatcatgtgactaacgtc
tga
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