Salvelinus sp. IW2-2015 (Arctic char): 111972602
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Entry
111972602 CDS
T05762
Name
(RefSeq) homeobox protein Nkx-2.2a-like
KO
K08029
homeobox protein Nkx-2.2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111972602
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
111972602
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
111972602
NCBI-ProteinID:
XP_023855383
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Position
LG14:19247304..19249690
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AA seq
265 aa
AA seq
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MSFSNTKTGFSVKDILDLPDTNGGSETEETEDENEVETTETLTQNPSSEDTGNVPYKKSL
LCDGGGNPYSRWLASSSTIQYSLHGLSVDSRNEPKYPELSADESQDIDRDATGDSSDSGK
KRKRRVLFSKAQTYELERRFRQQRYLSAPERERLANALLLTPTQVKIWFQNHRYKMKRAR
AEKGMEMVHLVSPRRVAIPVLVRDGKPCDTNKTQDLEASFRAGIPLSAYSAYSLHHMHMR
SHYSPDAISQLPSVHHMAQMYQWTW
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcagcaacacaaagacgggcttctctgtaaaagacattctggatctccccgac
accaatggaggttctgaaacggaggagactgaagatgagaacgaggtggaaacgactgag
actttgacgcaaaatccatcttctgaagacactggaaatgtgccttacaagaagagcctt
ttgtgtgatggtggtggtaatccctactcaagatggcttgcctcctccagcaccatccaa
tattcattgcatggtttgtcagttgattctcgaaacgaaccaaaatatccagagctgtcc
gccgacgaatcccaagatatcgacagggacgccacaggtgacagcagcgactcgggaaag
aagaggaaaaggagagtgctgttttccaaagctcaaacctacgaacttgagcgacgattc
cgacaacagagatatctctcggcgccggagagggagcgccttgcgaatgcactactactg
acaccgacccaggtgaagatctggttccagaatcaccggtataaaatgaagagagcacgc
gctgagaagggtatggagatggttcatctcgtgtccccaagacgggtggccattccggtt
ttggttcgggatggaaagccatgtgacactaacaaaactcaggatcttgaggcctcattc
agggctggaatacctctgtcggcgtatagcgcctattctctccatcacatgcatatgcgc
tctcactacagccccgacgccatctcacagctgcccagtgtgcatcatatggcgcaaatg
taccaatggacttggtag
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