Salvelinus sp. IW2-2015 (Arctic char): 111972655
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Entry
111972655 CDS
T05762
Symbol
tulp4
Name
(RefSeq) LOW QUALITY PROTEIN: tubby-related protein 4
KO
K24720
tubby-related protein 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
salp04990
]
111972655 (tulp4)
Domain-containing proteins not elsewhere classified [BR:
salp04990
]
Other domain-containing proteins
Tubby family proteins
111972655 (tulp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
WD40_Prp19
WDR55
Beta-prop_ELP1_1st
DUF3527
Motif
Other DBs
NCBI-GeneID:
111972655
NCBI-ProteinID:
XP_023855446
LinkDB
All DBs
Position
LG14:complement(9161203..9218682)
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AA seq
1635 aa
AA seq
DB search
MFAAVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRRRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRTTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDTDGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHILLHESDGIVSMSWNYPSFLVEDSSESDTDSDDYTPP
QVQRLKHLLTVSFTSGDISLMNNYDDLSPTLIHTGLKDVVVQWCSQGDLLAVAGMERAIL
PPDSSCLPPTRNAIVKFYNVCGEHIYTLDTPAQRPITTLCWGHRDSRLFLACGPVLYVVR
VEHRVASLQLLCQQGIAGALREEKDVAKLTMPSRLCSYVTTAFTPTIKPPIPDPNNMRDF
VSYPTAGNERLHCTMKRTEDNPEVGGPCYTLYLEYLGGLVPILKGRRISKLRPEFVIMDP
KTDGKADEVYGNSLISSMIDSCNCSDSSDIELSDDWVGKKSPKISRGSKSPKLPRINIDP
RKSPKLSRATQEISRSPRLPIRKPSIGSPSLTRREFPLDDITQHNYLAQVTSNIWGTKFK
IVGLATFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISMDYINLPVFSPNVFSEDEDD
LPVTGASGVADDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQNVQLDVLSKPTA
ISSVASAAAGGSPDQGQDTILTAQYTVPSRYSSPGQVIFGGLEMSRLLVGPPPSHHHHQQ
QQQSHPQSHQQPLQVSVEHEHLLKIKPTRSAPQLAEGDTVVFSAPLELSKMNPPPPYPGT
VAAAAASASAAAANASSGQAGGSNGTPPPMDLCLKKGEFSLYPPGQQAAQYPTPLGYERI
TTFDSRGNVEEVCRPRTRLVCNQNIYTLQVPGSSATLRVTSSSSSTDGKKIQLPYASATL
NRLTVPRYSIPSGDPPPYPDTANQNTTGGRSTGQRLDSSLIHATLRRNSREAALKVSQML
DPQRTLPPKAKSQNAALAASYQQRVPKALYTCSQCSSNSSGLSSAASSAPSGTANGIAGG
TIIRQDFPPGNGAPHSTVIVHSNSASPLVSQSSYNLLSLDSSGNGGGGGNRDRADYVNSA
FTEDEALSQSLRHLALGSADVSGLTVKRPPPYQWDPATTEEVWVPQERTGTMSSAGPTGP
HKPPPLILSPAQHLDISRLPFILSPKSPTSPSAASFQAAAAAAGYQISLQYAPGTTYSGP
QQQPMPGSPRLCSPKEVXAPVPFNQQDATLVLPPGYPANLSNLACCPLPPMYPGGSSCAG
LPIPPIALHTPWGTYNPCPPMPSPSGHCPPCPPSSQTMVDKSVLSPPPPPPPPPPPPPAE
LQLQGHGGSPEAMAMEAGEGFQEVLSLNESPVPSSAEKFGKKNRKRADGRVEEANAPAIA
EGGKSKKEGRALGDFNSLISSPRLGSREKKKPKGQKEQQLKAKKLSKAPTNSEFQDSSES
EPELFISGDELLNQCQSGKKGWKSKRSLRAASELEEIKCRKANEKEDRGLGSQGFVYVMA
NKQPLWNEATQVYQLDFGGRVTQESAKNFQIELEGRQVMQFGRIDGNAYILDFQYPFSAV
QAFAVALANVTQRLK
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgcagtggagcatggccccgtcctgtgcagcgactccaacatactctgcctg
tcatggaagggccgggtacccaagagcgagaaggagaagccggtgtgccggcggcgctac
tatgaggagggctggcttgccacagggaatgggagaggggttgtcggggtaacgttcaca
tccagccactgcagaagggatcggactaccccacagaggatcaacttcaacctgagagga
cacaatagtgaggtggtgctggtgcgatggaatgagccctttcagaagctggccacttgt
gacacagacggagggatctttgtgtggatccagtacgagggccgctggtctgtggagctg
gtcaacgatcgcggggctcaggtgagtgacttcacctggtctcatgatggtacccaggct
ctcatctcttaccgtgatggctttgtcctggtgggctcggtcagcggccagagacactgg
tcatcagagatcaacctggagagccagatcacctgtggtatctggacccccgatgaccag
caggtattgtttggtactgcggacggccaggtgatcgtgatggactgccacgggcgcatg
ctggcccacatcctgctgcacgagtcagacggcattgtcagcatgtcatggaactacccc
agcttcctggtggaggacagcagcgagagcgacacagactctgacgactacacaccacca
caagtccaacgtttgaagcatctgctgacagtcagcttcacctctggagacatcagcctg
atgaacaactatgatgacctctctcccactctaatccacactggcctaaaagatgtggta
gtccaatggtgttctcagggggatctcctggccgtggctgggatggagagagctatcttg
ccccccgactcctcctgtctacctcccaccagaaacgccatcgtcaagttctacaacgtc
tgcggagagcacatctacacactggacacgcctgcacaacgtcccatcaccacgctgtgc
tggggtcaccgggactctcgtctgttcttggcttgtggtccggtactctacgtggtgcgg
gtggagcaccgggtggccagcctgcagctgctgtgccagcagggcatcgccggggcgctc
cgggaggagaaggacgtggcaaagctcaccatgccctctcgtctctgttcttacgtcacc
acagccttcacacccaccatcaagccccccattccagaccccaacaatatgcgtgacttt
gtgagttacccgacggcggggaacgagcggctgcactgcaccatgaagcggacggaggac
aaccctgaggtgggcgggccctgctacaccctctacctggagtacctgggcggcttggtg
cccattctcaagggccgacgcatcagcaagctccgtcccgagttcgtgatcatggacccc
aagacggacggcaaagcagatgaggtgtatgggaacagtctgatctcgtcgatgatagac
agctgtaactgttcagactccagtgatatagagctgagtgacgactgggtcggcaagaaa
tccccaaagatatccagaggcagcaagtctcccaaacttcccaggatcaatattgacccc
aggaagtcccccaaactgtcccgcgctacccaggagatctcgcggtcgccacggttaccc
atccggaagccgtccattgggtccccaagtctcacccgcagagagttccccttagatgac
atcacacagcataactaccttgctcaggtcacatccaacatttggggaacaaagtttaag
attgtgggacttgccaccttcttgccaaccaatcttggtgcagtgatctacaagacaagt
ctgctccacctgcagcccagacagatgaccatctacctgccggaggtgcgtaagatctct
atggactacatcaacctgcctgtgttcagccccaacgtcttcagtgaggatgaggatgac
ctgcctgtcaccggggcctcgggtgtggccgacgacaaccctccctgcactgtcaacatc
cccattgcccccatccacagtcccgcccaggccatgtcccccacccagagcatcggcctg
gtccagtccctcctagccaatcagaacgtccagctggatgtcctatccaaacccacggcc
atctcctccgtggcttctgcagcggcaggggggtcacctgaccagggccaggacaccatc
ctgaccgcccagtacacggttcccagcaggtactccagtcctggacaggtcatctttgga
gggctggagatgagccggcttctggttgggcctcctccctctcatcatcaccaccaacaa
caacaacaaagccatccacagagccatcaacaaccactgcaggtcagcgtagaacatgag
cacctgctgaagatcaaacccacccgctctgccccccagctggctgagggggacacggtg
gtgttcagcgcccctctggagctcagcaagatgaaccccccgcccccctaccctgggacg
gtggccgctgctgcagcctccgcctctgctgcagcagccaacgcctcctctggacaggct
gggggaagtaacggcacaccgccgccaatggacctgtgcctgaagaagggcgagttctcc
ctgtatcctcctggccagcaggcggcacagtacccaacgccgctaggctacgagcggata
actacgttcgacagcaggggtaacgtggaagaggtgtgccggcctcgaacgcggcttgtc
tgcaaccagaacatttacacgctccaggtcccgggaagctcagccaccctccgggttacc
tcctcttcttcctcaacagacgggaagaagatccagctgccctacgcctcggcaaccctc
aacaggctcaccgttccccgctattccatacccagtggagatccgcccccctaccccgac
acagccaatcagaacaccacaggggggaggagcaccggacagaggctggacagcagtctg
attcatgccacactcaggcggaacagccgagaggccgctctcaaagtttcccagatgctg
gaccctcagaggaccctgccccctaaagccaaatcccaaaacgctgcactggcggcttcc
taccaacagagggtgcccaaagccctgtacacctgcagtcagtgcagtagtaacagcagt
gggcttagcagtgcagccagcagtgctcccagtggaactgcgaatggaatcgcaggaggt
acaatcattagacaggattttcctccggggaatggagctcctcacagcacggtgatcgtc
cactccaacagcgcttctcccctagtctctcaatcctcctacaacctgctgagcctagat
agctctgggaatggaggaggaggtgggaacagagacagggctgactatgtgaactcagcc
ttcacagaggatgaagcactaagtcagtcattgaggcatctggcactagggagcgcagat
gtgtctggactgacagtcaagaggccaccgccgtaccagtgggacccagccaccactgag
gaggtgtgggtgccccaggaacggaccggtactatgagctctgctggtcccactggaccc
cacaaaccacccccgctcatcctcagcccagcccagcacctcgacatctcccggctgcct
ttcatcctctcccccaagtcccccaccagccccagtgctgcctctttccaggctgccgct
gcagctgcaggttaccagatctcccttcagtacgctcctggcacaacctacagtgggccc
cagcagcagcccatgccaggctctccccgtctctgctcccctaaggaggtgrtggccccg
gtccctttcaaccagcaggatgccaccctggtcctaccacctggctatccagccaacctg
tctaacctggcctgctgccccctccctccaatgtacccggggggaagctcctgtgccggg
ctccccatcccccccattgccctacacaccccctggggcacctacaacccctgccccccc
atgcccagcccctcggggcactgccccccatgccccccaagctctcagacgatggtggac
aagtcagtcctctctccccctcctcccccaccgcctccccctccaccacccccagcagag
ctgcagctgcagggtcacggtggctcaccagaggccatggcaatggaggccggagagggc
ttccaggaggtcctctccctcaacgagagccctgtgccgagcagtgctgagaagtttggc
aagaagaaccgcaagcgggcagatggcagggttgaggaggccaatgcaccggccatcgcc
gagggaggcaaatccaagaaggaaggccgggccctgggtgacttcaactctctgatctcc
agcccgcggctgggcagcagggaaaagaagaagcccaaaggccagaaggagcagcagctg
aaggctaagaagctgagcaaggctcccacaaacagcgaattccaggacagctcagagagt
gaacctgagctcttcatcagcggggacgagctgctcaaccagtgccagagcggcaagaag
ggctggaagagcaagaggagcctacgggcggccagcgagctagaggagatcaagtgccgc
aaggccaatgagaaggaggaccgcgggctgggaagccagggctttgtttatgtgatggcc
aacaagcaaccactgtggaatgaggccactcaggtctaccagctggactttgggggacgt
gtcacacaggagtcrgccaagaacttccagatcgaactggaggggagacaggtgatgcag
tttggcaggattgacggcaacgcctacatcctggacttccagtacccgttctctgctgtt
caagccttcgcagtggctctagctaatgttactcaacgcctcaaatga
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integrated database retrieval system
