KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111972686
Entry
111972686         CDS       T05762                                 
Name
(RefSeq) collagen alpha-1(X) chain
  KO
K19479  collagen type X alpha
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 111972686
NCBI-ProteinID: XP_023855484
LinkDB
Position
LG14:16755722..16762096
AA seq 661 aa
MDLRVTSVLLLLVALAVATPERYYHVQKVAKQQQHYPSKSHVQTVSGEPGIPGSPGEPGP
MGPPGPPGNNGVGHTGQQGPPGAPGPAGYSAAGKPGNPGGPGKPGSNGMPGEKGHTGATG
AMGPRGSPGSAGSPGPAGYSSAGKPGPHGLPGGMGPRGESGLKGHPGIPGLQGQKGERGV
GIPGAPGANGQVGPMGPSGMPGQPGVGKSGAPGYPGESGKSGTPGRDGAPGAMGQPGPKG
HNGNPGVGAPGKSGENGSPGMPGNMGPKGPQGHAGQPGAPGLPGVGKPGANGMPGDRGSP
GTSGTTGQKGEPGPTGYTGATGATGLMGPAGPQGARGFQGEPGMQGSKGDVGMLGAPGAK
GTKGDQGHQGYAGKAGIPGAAGPAGATGATGHQGNKGAQGHAGSPGQPGSNGLAGAKGHT
GTPGGPGKPGESGIPGTRGPVGPSGPAGQAGLRGHAGLPGAPGPAGQMAKGMSGPMGPPG
APGSRGHDGNPGAMGPPGQPGPPGEMVYHHEKSMPIKSHEIMMPHEMMKAPMSAFSAVLT
MAYPSAGSPVPFNQIIYNGEQHYDPQTGIFSCQVPGLYYFSYHMHVNGANALVALYKNGE
PIMFSYDEYNKGFLDQLSGSTVLMLNAHDQVYIQVPDEETNGVFAADNVHCSFTGFLIAS
T
NT seq 1986 nt   +upstreamnt  +downstreamnt
atggacctcagagtgacaagcgttctcctcctcctggtggccttggccgtggcaacacca
gagagatactaccatgtacagaaagtagccaagcagcagcagcattatccttctaagagc
catgtccaaactgtttcaggtgagccaggtattcccggatcccctggtgagccaggacct
atgggcccccctgggcctcccggcaataatggcgtgggacatactggacaacagggccca
cccggggcccccggacccgctggctactccgcagctggcaagcctggcaatccaggtggt
cctgggaaaccaggtagtaatggaatgcccggtgagaagggtcatactggtgcaactgga
gccatgggtccaagaggatcccccggttccgctggaagcccaggacctgctggatactct
tctgctggcaaacctggcccacacggtctgcccggaggcatggggccaaggggtgagagt
ggacttaaaggacatccaggtatccctggtctgcaaggacaaaagggagagaggggagtt
ggtattcctggggcaccaggtgcaaacggtcaagtgggcccaatgggaccctctggtatg
ccagggcaacccggagttggtaagtctggtgcccctggataccctggggagtctgggaag
tcaggtactccaggtagggatggagctccaggagctatgggtcagccagggccaaagggc
cacaatggaaaccctggggtaggagcaccaggaaaatcaggtgagaatggcagtccaggt
atgcctggaaatatgggacctaaaggtccccagggacatgccggacaaccaggtgcacct
ggcttaccaggagttggtaaaccaggagctaatggcatgccaggtgacagaggatcaccc
ggtacatcaggaaccaccggtcagaaaggagagccagggccaacaggttacactggggca
acaggtgctactggccttatgggtccagctgggccacagggtgctagaggattccaggga
gaaccaggtatgcagggatctaaaggagatgtcggcatgctgggcgctccaggggcaaag
ggaaccaagggggatcagggacatcagggttacgcagggaaggcaggtatccccggggca
gcaggcccagctggtgcaaccggcgctacaggacatcagggtaacaagggagctcagggc
catgctggctctcccggtcagccaggttcaaatgggcttgcaggagcaaagggacacaca
ggcacacctggaggcccaggaaaaccaggcgagagcggcatcccaggaacaagaggacca
gtggggccttcaggtccagcaggtcaagcaggtcttaggggtcacgcaggtcttcccggt
gcacccggcccagctggccagatggccaagggaatgtctggtcctatgggtccacctgga
gctcctggttccagaggtcacgatggtaacccaggtgctatgggacctcctggtcaacct
ggtccccctggtgagatggtctaccatcacgagaagagcatgcccatcaagtcccatgag
attatgatgcctcatgagatgatgaaggcccctatgtccgccttcagcgctgttctgacg
atggcttacccatctgcgggttcacccgttccattcaaccagattatttacaatggggag
cagcactatgacccccagactggcatcttctcctgccaggtaccaggtctctactacttc
tcctaccatatgcatgttaacggtgctaatgcattggtggcactgtacaaaaatggtgag
ccaatcatgttctcatacgatgagtacaacaagggcttcttggatcagttgtctggcagc
actgtacttatgctgaatgcccatgaccaagtctacattcaggtccctgatgaggagacc
aatggtgtctttgctgctgacaatgttcactgctctttcactgggttcctgattgcctca
acgtga

DBGET integrated database retrieval system