Salvelinus sp. IW2-2015 (Arctic char): 111972830
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Entry
111972830 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6-like
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111972830
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111972830
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111972830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-RING_4
Prok-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
111972830
NCBI-ProteinID:
XP_023855703
LinkDB
All DBs
Position
LG14:31126193..31132884
Genome browser
AA seq
725 aa
AA seq
DB search
MVMDPPGGRDERRRQAERLRREEAYYHFINELSEEEYRLMRDSNLLGTPGEVTAEELRQR
LDGAKERVSSQPRPEPLPQNTEAGEEEGSSVEGEESEGGAATAEPGAETSNGDSLLEWLN
TFRRTGNATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININHEQPEPGEHSDAPDPSELS
PVPPPSTASSASIRTAPYTPARPSTYPLPRATQGRRAQIRRTRSSTTIPPLTPAPLTTPL
PPPTALSGTAALTLPPPPVPITPPILNPSISPPQLQPPSRASSQGEEQEEGVPTLDFPRV
PPQSGPQVASVGREPRSNRTRSRGRTRRAAAGGGTTSRSSRRRSRSPLQRNPAPNLATLP
PSGGNGNGVSNNGHTAEPGNRTASVSMETGEAVSEPAVLAEPGPEAGEQEGEAHTAGSGG
AGGVRRHPTIMLDLQVRRIRPGENRDRDSIASRTRSRARAAENTVTFESDSGGFRRTISR
SERAGIRTYVSTIRIPLRRISETGLGEPSSTALRSILRQIMTGFGELSSLMETEADAETT
EGMPGHQDPVGPNANTNTAQTYRSHSNESGTVAGGQAAETEREGGGDEEEGGQGRLGGSG
NGGIPTPDDGRPMSRDTNNLVENGTLPILRLAHFFLLNDEEDEEHPRGLTKEQIDILATR
TYGQASLEGEAGRACSVCINDYAQGNKLRRLPCAHEFHIHCIDRWLSENNTCPICRQSIL
PAHQD
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggaccctcctggcgggcgagacgagcggcgtcgtcaggcagagcgtcttcga
cgggaggaggcgtactatcacttcatcaacgagctgagcgaggaagagtaccgccttatg
agagacagcaacctgctgggcacacctggtgaggtgacagcggaggagctacggcagcgc
ctggacggggcaaaggagcgtgtgtcatctcagccccgccctgaaccactcccacagaac
actgaggccggagaggaggaggggagcagcgttgagggggaggagagcgagggaggggca
gctactgctgagccgggagcagagacgtctaacggcgactcactgctggagtggctgaac
accttccgacgtacagggaacgccacgcgcagtggccagagcggcaaccagacgtggcgc
gcggtcagccgcaccaaccccaacagtggagagttccgcttcagcctggagatcaacatc
aaccatgagcagccagagccaggggagcacagtgatgcccccgacccctcagagctgtcc
cctgtcccccctccatccacagcctcctcagcctccatacgcactgccccctacacccct
gcccggccctccacctatcccttacctcgagctacccagggcaggagggctcagatccgc
cgtacacgcagtagtaccaccatccctcctctgactcccgcacccctcaccacacccctg
cccccccctactgctctaagcggtacagcagccctcaccctcccaccacctccagtcccc
atcaccccccctattctaaatccttcaataagccctccacagctccaacccccaagcaga
gcttcctcccaaggggaggagcaggaggagggggttcctaccctggacttcccccgtgta
ccgccccagtctggcccccaggtggcgtctgtggggcgtgagcctcgtagcaacaggact
cgatctcgcggccggacccgcagggctgcagcaggaggtgggactacctcccggtcatct
aggagacgtagccgctcccctcttcagagaaaccccgcccctaacttggctaccttgcct
cctagtggtgggaatggaaatggtgtctctaataatggccacactgctgagcccggaaac
agaactgcttctgtctccatggagaccggtgaggccgtgtcagagccggctgtactagca
gagcctggcccagaggcaggtgagcaggagggagaggcacacacggccgggtcggggggt
gcagggggggtgcggcgccaccccaccatcatgctggatctgcaggtgcggcgcatccga
ccgggagagaaccgggaccgggacagcatcgccagccgaacccgttcccgggcccgcgcc
gccgaaaacactgtcaccttcgagagtgacagcgggggcttccggcgcacaatctcccgc
tcggagcgggccgggatccggacctacgtcagcaccatccggatccctctgaggaggatc
agtgagacaggattgggggagcccagctccaccgccctgcgctccatcctcagacagatc
atgaccggcttcggggagctcagctccctcatggagacggaggctgacgctgagaccacc
gagggcatgcccggtcaccaggaccctgtaggacccaatgcaaacaccaacaccgcacag
acctaccgtagccacagtaacgagagtggaactgtggcgggaggccaggcagcagagacg
gagagagagggggggggcgatgaggaggaaggagggcaggggaggttaggtgggagtggc
aacggtggaatcccaacccctgacgacggtcggccgatgagcagggacacaaacaacctg
gtagagaacggcacgttgcccatcctgcggctggcccacttcttcctgctcaacgacgag
gaggacgaggagcacccgcgcggcctgaccaaagagcagatcgacatactagccacgcgc
acctacggccaggccagcctggagggggaagcggggcgcgcctgcagcgtctgtatcaac
gactatgcccaagggaacaagctgcgccgcctgccctgcgcccacgagttccacatccac
tgcatcgaccgctggctctctgagaacaacacctgccccatctgcaggcagtccatcctc
cctgctcaccaggactga
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