Salvelinus sp. IW2-2015 (Arctic char): 111972889
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Entry
111972889 CDS
T05762
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03040
Spliceosome
salp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111972889
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111972889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
salp03041
]
111972889
Spliceosome [BR:
salp03041
]
Complex B
Other components
Prp19-related factors
111972889
Complex C
111972889
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
111972889
NCBI-ProteinID:
XP_023855772
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All DBs
Position
LG14:152470..166063
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AA seq
537 aa
AA seq
DB search
MSLTSFLPAPTQLSQDQLESEERARAQRSHSTALVSSRKEPPPYGYRKSWVPRSLEDFGD
GGAFPEIHVAQFPLEMGRKKKTSNALAVQVDAEGKIKYDAIARQGQGKDKVIFSKYTDLL
PKEVLNDDAPELQKPDEEAVKELTEKTRDALMKQVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAQMARDRRAGIKGHGGDKGGEDGEARERDEIRH
DRRKERQHDRNISRAAPDKRSKLQRDQDRDVSELIALGQPNPRASSEAQYDQRLFNQSKG
NGQGFSRGGDEMYNVYDQPFRRGSDMAQNIYRPTKSSDKDMYGDDLDTLMQSSKFVPDRE
FSGTDHGPRRDGPVQFEEDPFGLDKFLEEAKQHGGSKRPSTSRGSKDYDHDKKRRKE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttacgagctttctacctgcgccgacccagctgtcccaggaccagttggagtca
gaggagagagcccgggcacagaggtcccactccaccgccctggtctcctcccgcaaagaa
ccccctccctacggctacaggaagagctgggtgccacgctctctggaggactttggagat
ggcggtgccttccctgagatccacgtggcccagttccctctggagatgggcaggaagaaa
aagacatccaatgccctggcagttcaggtggatgctgaaggcaagatcaaatacgatgcc
atcgccagacagggacagggcaaggacaaagtgatcttcagtaagtacacagacctgctt
cctaaggaagtgctgaacgatgatgctcctgagctgcagaagcctgacgaggaggctgtc
aaagagctgacggagaagacccgcgatgctctgatgaagcaggtctctcagaagatcgct
gcagccatgcctgtgagggcagcagacaaacaggcccctgcacagtacatcaggtacact
ccttcccagcagggtgtggccttcaactccggggccaaacagagggtcattcgtatggtg
gagatgcagaaggaccccatggagcccccacgcttcaagatcaacaagaagattcctcgt
ggtcctccctcccctcctgcaccagtcatgcactctcctagcagaaagatgactgtcaag
gagcaacaggagtggaagattcccccctgtatttcaaactggaagaacgcaaagggttac
accatcccactggacaagcgtctggctgcggacggtagaggactgcagaccgttcacatc
aacgagaactttgccaaactggccgaggcgctctacattgctgacagaaaggccagagag
gctgtggagatgagagcccaggtggagaagaagatggcccagaaagagaaggagaagaag
gaggagaagctcagagagctggctcagatggcccgagaccgcagggcagggatcaaaggt
cacggaggggacaaaggtggagaggacggtgaggccagagagcgtgacgagatccgtcat
gacaggagaaaagagagacagcacgacaggaacatctccagagctgcccctgataagagg
tcgaagctgcagagagaccaggacagagatgtcagtgagctcatcgctctgggccagccc
aaccctagagcctccagcgaggctcagtacgaccagagactgtttaaccagagcaagggg
aatggacaggggttttcccgggggggggatgagatgtacaacgtgtacgaccagccgttc
aggagaggcagcgacatggcccagaacatctacaggcccaccaagagctctgacaaggac
atgtatggggacgacctggacacactcatgcagagcagcaagtttgttccggaccgtgag
ttctctggtacggaccacggtcctcgtcgtgacggtcctgtccagtttgaggaggatccg
ttcggtctggacaagtttttggaggaggcgaagcaacatggcggctccaagagaccctcc
accagtagaggctccaaggactacgaccacgataagaaacgcaggaaggagtga
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