Salvelinus sp. IW2-2015 (Arctic char): 111972915
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Entry
111972915 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-2-like
KO
K05637
laminin, alpha 1/2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04510
Focal adhesion
salp04512
ECM-receptor interaction
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111972915
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111972915
09142 Cell motility
04820 Cytoskeleton in muscle cells
111972915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
DUF948
Motif
Other DBs
NCBI-GeneID:
111972915
NCBI-ProteinID:
XP_023855794
LinkDB
All DBs
Position
LG14:10919083..11069461
Genome browser
AA seq
3202 aa
AA seq
DB search
MKGLSFFTLIALLWQCSRAQQRGLFPAVLNLASMADISSNATCGETGPEMYCKLVEHVPG
LQVRNTQCRICNNNSERQFERHPIEYAIDGTNRWWQSPSIKNGMDYHYVTVTLDLQQVFQ
IAYMILKAANSPRPGNWVLERSLDGVTFTPWQYYAITDTECLTRFNILPRTGPPSYTRDD
EVICTSFYSKIQPLENGEIHTSLINGRPSADDPSPTLLNFTSARYIRLQFQRIRTLNADL
MTLAFNDPRDVDPIVTRRYYYSIKDISVGGMCICYGHAKACPLNKQTKKFSCECEHNTCG
ESCDRCCPGYNQKPWMAGTFLTRHVCEKCNCHGKSEECYFNQTVAGNKQSLNSQGEYVGG
GVCVGCTRNTAGVNCQTCADSYYRATGLSPEDSDPCQPCSCDPEGSLSPACVPDQSQAEG
DLTAGSCHCKQGYGGQQCDRCTFGYSGYPNCIRCNCSLDGSLNKDPCLLPCVCKENVEGE
NCDRCKLGFYHLLGERLHGCEKCYCSGVASDCSDSHWTYHNETSMAGWTLTAEDGEGKVW
PGASRDRDRSQTLRIDNQEARRHLPAIYYWSAPGEYLGNKLPAYGGSLVYTVSYDAGEKD
QDIRVNSSPNVIIEGGGIKMIDSRFGLPVYPFSESTKRTLLYPDHFENQETGLPVSKRDF
MMALTNVSSLLIRASHSNERVAIYRLHSVSLEVASEFSSSEKMANAVEMCQCPPGYGGTS
CEMCSSGHRRVNSTMFKGVCEPCDCQGHATDCDDITGQCLGCTDQTTGFHCDECIPGFYG
DATKGTANDCLPCACPLNIPSNNFSPTCHVDPRGELICDRCQPGHTGPRCDRCSNGYFGQ
PTVKGGSCQLCQCNGNLDLASPRSCDPITGSCLRCRDGYGGTTCDTCAEGFYGDAIEAKN
CQHCQCHNNGSVSEVCHQENGQCQCKQHVVGRQCDECMPNCWWDAEEQVCKPCSCSRTGA
MSQRCDLEGRCICKPGFVGRRCDLGRQGYERRETRRPIERVRLQQVQRWGSSRSGGCPRA
AYRTSAPQTYGIQSAGVCVPCNCNSFGSKSFDCDESGQCRCQPGVTGPKCDRCAPGHFNF
QEGGCTPCQCAHVANNCDANTGQCVCPPNTVGERCDKCAPNHWGHDIMAGCKACGCNQVG
SMTQQCNPNTGCCMCRDQFQGEKCSECKLGYRDFPQCISCKCNVAGSDSQTCDADQDVCA
CADRTGQCSCKVNIQGLKCDQCKTRTFGLSTSNPLGCSQCYCFGMSSTCTEAQGLIRMWL
SLKPEQTKLPLVDKANLQETTSGVTFQHPEIIANADLVSQKLTELYYWRLPEQFHGSMIT
AYGGKLKYAIYFEGRDEAGRTSYEPQVIIKGGPNRDKVMVRHMQGLQIGQLTRHEIDMTE
HEWKYEDKKAMTREDFMDVLFYVDYVLIKASHGNMMRHSRISEISMEVAEEGRPSVESER
AHQIEKCDCPLGYSGLSCEECGAGFYRLSARSGGAASRAGIGSCVQCQCNRHSEACDPET
SICQNCQHNTEGDRCERCAPGYYGVVRGRPDDCKPCACPLTNHENNFSPTCVTEGFNDYR
CTACPEGYEGKYCERCATGYHGDPRAPGGKCEECKCDPYGAWPQPCDPRSGQCRCRPGAT
GRTCSQCMERHVCGPSGIVSCDDDCAGLLIRDMDRLHRIITSVNLTTPLPPPYKVLYRFE
NMTQELKHMLSPQNSPERRLQLADSNLGSLVTEMDDLLSRATKVSADGEQTGDDANRIHK
RAEDLELFVKNTLLAAEVLKVKASELNETLGRRNGAPEKSLNEMHQEIETMLAELRKRQL
GGKKHISEEELGLAEALYQKVKRLFGDPHQATEDLKAEVTEKMGDHRAKLDDAQALLKDA
QGKSREAGALSGQNQRNLTTLERKRDAVSSVKKGTEDVLADGERILAEANGLSDSINKEI
EDLEEMEHELGPLHEQLDYRVSHLTQGLSGNTLTDLLQDAENHAAELNESSNILDRILAE
AKNLSFNATAAFNAYSNIKDFIEEADKEAKQARARGTEALQLASGPKGSLKDNAKNSVRK
SVQLWNEARQLENDVKENAESVGSLQARVKAGGLKNKGLLKDLDDTLRKLNAIPNDTAAK
LQATKAKAGDANDTANDVLARLRDMNLSLMGLKKNYSKLEDDVNKANNMIQDPEKNIHAA
GAKVKDLEDEADRLLDKLKPIKELQDNLKKNISQIKELINQARKQANSIKVSVSSGGDCI
RAYRPEIKKGRYNTITVNVKTTSPDNLLFYLGSVKYIDFLAIEMRKGKVNFLWDVGSGVG
KVEYPDMTINDGNWHRIEASRNGINGTISVHALEGPKAGIMPTSKSGTSPEGYTILDVDQ
NAYLFVGGMLGSVKKADAVKTTTFSGCMGETYLDNKAIGLWNYREREGDCKGCVVSPQPS
DTEGTVQFDGEGYAAVSRPTRWNPNVSTVMFKFRSFSTDSLLMYFATKDMKDFMSAELSD
GLVKVSFDLGSGTGSVFSIKRHNDGRWKSFTMARMKKQATVTIVDIDTNEEEKLVVSSQG
SATGLNLKEEERIYFGGLPTIGNYRSEVTKKKYAGCMRDIEVSRTPYNLLSSSDYTGLTK
GCSVENLHTVSFSKPGHMELRSMSLDVGTEISLSFATKSDRGIILFGSGSSNGASSQFKL
PKRRRRQSGEPFLAVLLNKGSLEVLVFTGSHSPRRVVRKPDQGILHDGREHTLRIERLGG
RSFAVQVDEELKREQALPNDQPMGIKRLFIGGIPPDVELSSQRPNDPFEGCIWNLMINTI
LTDFSQPVAFQNAEIGQCPNLAPPPPPLPLPEEEEEEEEGTKGEDVSQPLQPEAPAVPSP
TPTPRQTPPPPTDALPVVPPELSPATEEPDHGAVTVPRVPLFSLTSLIIDFELRTTAESG
XVFYMARSTTPDFATIQVKEGMAHLGYDXGHGNTSVSVPRIIQRRNWHQEKQRGVLVIDN
RYTKHTTSPKKADILDVVGMLYIGGLPVNYTTKRIGPVLYSINGCIRNFKMLGNVLDMDA
PTSSHHVGSCFISTEKGTYFDGSGYVKAVGSYRVGLDVSLELEFRTSQSNGVLLGVSSQV
DTKMEGLGIELHNGKLLFHVDNGAGRITAEYQPEVEAGLCDGQWHSVTAHKLRHRLEIIV
DGRKEEAESPNARSNTVDTNDPIYVGGYPEGLKQFGLTSSTSFKGCMRNLKITKASKVLE
VQFNKGLEFKGVQPLTCPANAA
NT seq
9609 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtctatcgttttttacactcatagcgttgctatggcaatgcagccgagcgcag
caaaggggtctgttcccagcggtgctgaacctggcctctatggcagatatcagcagcaac
gctacctgtggagagacaggaccagagatgtactgcaaactggtggagcacgtccccgga
ctgcaagtcaggaacacccagtgccgtatctgtaacaacaacagcgagaggcaatttgag
cgccacccgattgaatatgccatcgatggaactaacagatggtggcagagccccagcatt
aagaacggcatggactaccattacgtcacagtcactctggacttacagcaggtgttccag
atagcctatatgattctgaaagctgccaactcccccaggccaggtaactgggtgctggag
cgttccctggatggggtgacctttaccccctggcagtactatgccatcacagacacagag
tgcctcactcgcttcaacatccttccccgcaccggaccgccatcctacacacgcgacgac
gaggtcatctgcacctctttctactccaaaatccaacccctggagaatggagagatccac
acctctctgatcaatggaaggccgagcgctgatgacccctccccgactttactgaacttc
acctccgcacgctacatccgcctgcagttccagcgaatcagaaccctcaacgctgacctc
atgaccctggccttcaacgacccccgcgatgttgaccccatcgtgaccaggcggtattac
tactctatcaaagacatctcagttggagggatgtgtatctgctatggccatgctaaagcc
tgtcctctgaacaaacagaccaagaaattcagctgtgagtgtgaacacaacacgtgtggg
gagagctgtgaccgctgttgccccggatacaaccagaaaccctggatggctgggaccttc
ctcactcgccacgtctgtgagaagtgcaactgccatgggaaatctgaggagtgttacttc
aaccagacagtggcaggcaacaaacagagcctgaactcccagggggagtacgtgggggga
ggggtgtgtgtagggtgcaccaggaacacagccggagtcaactgccagacctgtgctgat
agctactacagagccactgggttgagtccagaggactccgacccgtgtcagccctgctcc
tgtgacccagaaggttctctgtccccagcatgtgttccagaccagtcccaggctgaagga
gacctcacggctggatcctgccactgtaagcagggttatgggggacagcagtgtgacagg
tgtacctttggctacagcggctaccccaactgtatccgctgtaactgcagtctagacgga
agcctgaacaaggatccgtgcctgctgccctgtgtctgcaaggaaaacgtagagggggag
aactgcgaccgctgcaagctgggtttctatcatctcctgggcgagcgtctccacggctgt
gagaagtgctactgttccggcgtggcgagtgactgctccgattcccactggacataccat
aatgagacatccatggccggctggaccctcacagcagaggatggggaggggaaggtgtgg
cctggcgccagcagagacagagacaggtcccagacactcaggatcgataaccaggaagcc
aggagacaccttcctgctatctactactggagcgcacctggagagtacctgggcaacaag
ctcccagcctatggaggaagtcttgtctatacagtctcatatgatgcaggggagaaagac
caggacatcagagttaactcttctcctaatgtcataatagagggcggcgggataaaaatg
attgacagtcggttcggtctgccggtgtaccctttctcggaaagcacaaagagaactctg
ctctaccctgaccactttgagaatcaggagacaggcctgcctgtcagcaagagagatttc
atgatggctctaactaatgtgagcagcctcctcatcagagcctcacacagcaatgagcgg
gtcgccatctacaggctccattctgtcagtctggaggtggccagtgagttctccagcagt
gagaagatggccaatgctgtggagatgtgtcaatgtcctcctggatacggtggaacgtct
tgtgagatgtgttcatcgggtcatcgaagggttaacagcaccatgttcaaaggagtgtgt
gaaccatgcgactgccaaggccatgccacagactgtgatgacatcactggacaatgcttg
ggctgcactgaccaaaccactggattccactgtgatgaatgtatccctggtttctatggg
gacgctaccaagggaacagccaatgactgcctgccctgcgcctgccccctcaacatcccg
tccaacaatttcagccccacgtgccatgtggacccgcgaggggagctgatatgtgaccga
tgccagccggggcacaccggaccacgctgtgacaggtgctcgaatggctactttggtcag
ccgacggttaaggggggctcatgccagctctgccagtgtaacggtaacctggacctggcc
tcaccgcggagctgtgaccccatcaccggctcctgcctgaggtgtcgggatggctacggg
ggaaccacctgcgacacctgcgccgaggggttctacggggacgccatcgaggccaaaaac
tgccaacattgccagtgtcacaacaatggctctgtgtcggaggtctgccaccaggagaat
gggcaatgccaatgcaagcagcatgtggtgggacggcagtgtgacgagtgcatgcccaac
tgttggtgggatgcagaggagcaggtgtgtaagccgtgctcctgcagccgtacaggggcc
atgtcccaacgctgcgacctggaaggacgttgtatctgtaagcccggcttcgtgggccgt
cgctgcgacctgggtcgccagggttacgagcgtcgggagacgcgcaggccaatagagagg
gtccggctgcagcaggtccagcgctggggctcgtcccgctctgggggctgtcccagggca
gcctaccgcacctcagcgccccagacttatggcattcagtccgctggagtctgtgtcccc
tgcaactgtaactcctttgggtccaagtcctttgactgtgacgagtcgggccagtgccgg
tgccagcctggtgtcactgggcccaagtgtgaccgatgtgctccaggacacttcaacttc
caggagggtggctgcacaccttgccagtgcgcccatgtggcaaataattgcgatgccaac
acgggacagtgcgtctgccctcccaacaccgtgggggagagatgtgacaaatgtgccccc
aatcactggggtcatgatatcatggcgggctgcaaggcctgtggctgtaaccaggtgggc
tcaatgacgcagcagtgtaaccccaacacaggctgctgcatgtgccgggaccagttccag
ggagagaagtgcagcgagtgtaagctgggctaccgggacttcccacaatgcatttcctgc
aaatgcaacgtggccggttcagacagccagacctgtgatgcagaccaagatgtgtgcgcc
tgtgcagacaggactggacaatgcagctgcaaggtgaatatacagggtctgaagtgtgac
cagtgtaagacgaggactttcggcctgagcacaagcaacccactaggctgcagtcagtgt
tactgctttggtatgtccagcacctgtactgaggcacagggcctcatccgcatgtggctg
tccctgaaaccagagcagaccaagctgcccctagtggacaaagccaacctgcaggagacc
acaagcggagtgaccttccagcacccagagatcatcgctaacgctgacctggtctcccag
aagctgaccgaactctactactggagactgcctgaacaattccatggttccatgatcaca
gcctacggcggcaagctgaagtacgccatctactttgaggggcgtgacgaggcaggccgc
acctcctacgaaccccaggtcatcataaagggagggcccaacagagacaaggtgatggtc
cgccacatgcagggactgcagattggacaactcacccggcatgagatcgacatgacagag
cacgagtggaagtacgaagacaagaaggccatgacacgcgaggacttcatggacgtgctg
ttttatgttgactacgtcctcatcaaggcttcccatgggaacatgatgagacacagcagg
atctctgagatttctatggaggtggcagaggagggaaggccgtccgtggagagtgagcgg
gctcaccagatagagaagtgtgactgccccctgggctactccggcctgtcctgcgaggaa
tgtggggccgggttttaccgcctgtctgcccgcagcggtggcgcagcctccagagcaggc
atcgggagctgtgtgcagtgccagtgcaacaggcacagtgaggcctgtgacccagagaca
tccatctgccagaactgccagcacaacacagagggggacaggtgtgaacgctgtgcccca
ggatactatggtgtagtgaggggcagacccgacgactgcaagccctgtgcctgccccctc
accaaccatgagaacaatttcagccctacctgtgtaacagagggattcaacgactaccgc
tgtactgcctgccctgagggctatgagggaaagtactgtgagagatgtgccacgggttac
cacggcgacccccgtgcccccggcgggaagtgtgaggagtgtaagtgtgacccgtacggg
gcgtggccccaaccgtgtgacccccgctcaggccagtgccgctgccgacccggggccact
ggacgcacctgcagccagtgcatggagaggcatgtgtgtgggccctctgggattgtgtcc
tgcgatgatgactgtgccgggctcctcatcagagatatggatagactgcatcgtatcatc
accagtgtcaacctcaccacccctctgccaccgccctacaaagtcctctaccggtttgag
aacatgacgcaggaactcaagcacatgctctcgccacagaattcgccggagaggcgcctg
cagctggccgacagtaacctgggcagcctggtgacagagatggacgatctgctgagtcgg
gcgaccaaagtgtcggcagacggcgagcaaacaggtgacgatgctaatagaatccacaaa
cgagctgaagacctggaactttttgtcaagaacaccctactggctgcagaagttctgaag
gtcaaggcttcagagctgaatgagactctgggcaggaggaacggagctccagagaagagc
ctaaacgagatgcaccaggagatcgagaccatgttagccgagctccgcaaacgccagctg
ggaggcaagaagcacatctcagaggaggagctgggactggcggaggccctgtaccagaag
gtgaagcgtctcttcggggacccccaccaggccacggaggacctgaaggcagaggtgaca
gagaagatgggtgaccaccgggccaagctggatgacgcccaggccctgctgaaggacgcg
caggggaagagcagggaggctggggccctgtccggacagaaccagcggaacctcaccacc
ctggaaaggaagagggatgctgtgagctcagtgaagaaaggaactgaagacgtgctggca
gacggagagcgcattctggctgaagctaacggtctctcagacagcatcaataaggagatt
gaggatctggaggagatggagcatgagctgggtcctctccatgagcagctggactacaga
gtgagccatctgacccagggcctgagtggcaacaccctgactgacctgctgcaggacgct
gagaaccacgctgctgagctcaacgagtcctcaaacatactggaccgcatcctggctgaa
gccaagaacctgtcctttaatgccacggcagcgttcaacgcgtacagcaacatcaaggac
ttcatcgaggaggctgacaaagaggcaaagcaggccagggcacgtgggacagaggccctt
cagctggcatcaggacccaaaggctctttgaaggataacgccaagaactctgttcggaag
agcgttcaactgtggaacgaagccaggcagttagagaacgatgtgaaagagaacgctgag
agtgtgggcagtctccaggccagggtgaaagctggtggcttgaagaacaagggcttgctc
aaggatctggacgatacgttacggaagctgaatgcaatccccaatgatacagcagccaag
ctccaggccaccaaggccaaggcaggagatgccaacgacacagccaacgatgttctggcc
agactgagagacatgaacctgagcctgatgggcctgaagaagaactacagcaagctggag
gatgacgtcaacaaggccaacaatatgatccaggaccctgaaaaaaacatccatgcagcg
ggggccaaggtgaaagacctagaggacgaggcagacagactgctggataagctgaagccc
atcaaggagttgcaggacaacttgaagaagaacatctctcagattaaagagttgatcaac
caggcgcgcaagcaggccaactctattaaagtgtccgtgtcctccgggggagactgtatc
cgtgcttatcgaccagaaatcaagaaaggtcgttacaacaccatcactgtgaatgtgaaa
accacctcccctgataacctactcttctacctgggcagtgtcaaatacattgacttcctg
gccattgagatgcgtaagggcaaggtcaacttcctatgggacgtgggctctggagtgggc
aaggttgagtaccctgacatgactatcaacgacggcaactggcatcgcatcgaggcctca
cggaatggtatcaatggcactatctctgtccatgcactggagggtcccaaagctggcatc
atgcccacctctaagagtggcacttctcctgagggctatactatcctggatgtggaccag
aatgcctacctgtttgtcggtggcatgttaggcagtgtgaagaaagcggacgcggtcaaa
accactactttctccgggtgtatgggagagacatacctggacaacaaagctattggcctg
tggaactacagagagagagaaggagactgcaaaggatgtgtagttagcccccagccgtca
gacacagaggggacggtacagtttgatggggagggttatgctgctgtgagccggcccacc
agatggaaccccaatgtctccaccgtcatgttcaagttccgctccttctccaccgactcc
ctgctcatgtacttcgccaccaaggatatgaaggactttatgagtgctgagttgagtgat
ggtctagtgaaggtgagttttgacctgggctcaggcaccggctcggtgttcagtatcaag
agacacaacgacggcaggtggaagtccttcactatggcccgcatgaagaaacaagccaca
gtgaccatcgtggacatagacaccaatgaagaggagaagctggtggtgtcatcccaaggc
tctgccaccgggctcaacctcaaggaggaggagaggatttactttgggggtttgccaacc
attggaaactacaggtcagaagttaccaagaagaagtatgctggctgtatgagagacatt
gaggtttccagaacaccctataacctgctgagcagctccgactacaccggcctgaccaaa
ggctgctctgtagagaacctccacacggtgagcttctccaagccaggtcacatggagctg
aggtccatgtccttggacgtcggcacagagatcagcctgtccttcgcaaccaagagcgat
aggggtatcatcctgtttggcagtgggagcagcaatggagccagttcccagttcaaactc
cccaagaggagacgcaggcagtctggggaacccttcctggccgtgttgctgaacaagggg
tccctggaggtgttggtgttcacaggcagccacagcccacgcagggtggtccgcaagcct
gaccagggcatcctgcacgacgggagagaacacactctgcgcatcgagagactgggtggc
aggtcgtttgccgtccaggtggatgaggagctgaagagggagcaggcccttcccaacgac
caacccatgggcatcaagagactgttcatcgggggtatcccccctgacgtagagctcagc
tcccagagacccaacgaccccttcgaaggctgcatctggaacctcatgattaatactatc
ctcacagacttctcccagcccgtggcttttcagaacgcagagatcggccagtgtcccaac
ctggctcctccccctcccccgctgcccctcccagaagaagaggaggaagaggaggagggg
accaagggagaagacgtgtcccagccgctccaacctgaggctcctgctgtaccatcaccc
accccgacacccagacagacccctcctcctcccactgacgcgctccctgtcgtacctcca
gagctcagccccgccacagaggaacctgaccacggtgctgtcacagtcccacgggtacca
ctcttctcactcacttcactgatcatagattttgagctgcggaccacagcagagtccggc
nctgtgttctacatggcgagatcaaccacgccggacttcgccaccatccaggtgaaggag
ggcatggcccacctcggctacgacnctggccacggcaacacctcagtcagcgtgccacgc
atcattcaacgacggaactggcaccaagagaaacagagaggtgtactggtgatagacaat
cgctacaccaagcacaccaccagccccaagaaggctgacatcctggatgtggttggcatg
ctgtacataggtggcctgcccgtcaactacaccaccaagaggatcggaccagtcttgtac
agtatcaatggctgcatcaggaatttcaagatgctgggtaatgtgttggacatggacgcg
cccacctccagccaccacgtgggcagctgtttcatcagcactgagaagggaacctacttt
gatggctctggatatgtcaaagcagtgggttcctacagggtgggtctggacgtgtctctg
gagctggagttccgtacgtcccagagcaacggggttctgctgggggtcagcagccaggtg
gacaccaagatggagggcctgggcatcgaactgcacaacggaaagctgctgttccacgtg
gacaacggagcgggccggatcacagcggagtaccagcctgaagtagaggcaggcctctgt
gacggtcagtggcactcggtcacagcccacaagcttcgccacaggctggagatcatagtg
gacggcaggaaggaggaagcagagagccccaacgccaggtccaacaccgttgacaccaac
gaccccatctacgtcggtggatacccagaggggctcaagcagtttggcctgacttccagc
acttcattcaaaggctgcatgcgcaacctgaagataaccaaggcatccaaggtgttggag
gttcaattcaacaagggcctggagttcaagggggttcaacccctcacttgcccagccaat
gcagcctaa
DBGET
integrated database retrieval system
