Salvelinus sp. IW2-2015 (Arctic char): 111973026
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Entry
111973026 CDS
T05762
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
salp03041
]
111973026
Spliceosome [BR:
salp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111973026
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
111973026
NCBI-ProteinID:
XP_023855923
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All DBs
Position
LG14:38175908..38190322
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AA seq
524 aa
AA seq
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MDGIGDVAVGVKRGSDELLSSSLYNSGSDMSSISDGTSNGSDSKKLRVEDRMEAPPSRVL
HIRKLPNETSETEVIALGLPFGKVTNILTLKGKNQAFLELGTEEAAITMVNYYSTVTPHV
RNVPVFIQYSNHKELKTDAGNQRAQAVLQAVSAVQGGGTPTSGSDLGLTAASSPVLRIII
DNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFNDPSTAQQAKIALDGQNIYN
SCCTLRIDYSKLVNLNVKYNNDKSRDYTRPELPAGDGQPAMDPNMAAAFQGKDSNSLLGK
IPGALSPLNAAAAAAAAAGRVALSGHSGSSGVLLASNLNEEMVTPQSLFTLFGVYGDTQR
VKILYNKKDSALIQMADASQAQLAMSHLNGQKMYGKVIRVALSKHTSVQLPRDGLDDQGL
TKDFTNSPLHRFKKPGSKNFQNIFPPSTTLHLSNIPTDVTEEDLRLLFSNAGGTVNAFKF
FQDHKMALLQMSTVEEAIQGLIDLHNYNMGDNHHLRVSFSKSSI
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggacggtattggagatgttgcagttggcgtaaagagaggatcagatgagctgctgtca
agcagtctctacaacagtggctctgacatgagcagtatcagtgatggtacgtccaacggg
agtgacagtaaaaaactgagagtggaagacaggatggaggctcctccttctcgtgtgttg
cacatcagaaaactgcccaacgaaacttcagaaacggaggtcattgccctggggttacct
ttcgggaaggtcaccaatatcctgactctgaaggggaaaaaccaggctttcttggagctg
gggacagaggaagcggcaattaccatggtcaactactactctactgtgacaccgcatgtt
cgtaacgtccccgtattcatccagtactccaaccacaaagaactcaaaacagacgccgga
aaccagcgggcccaggcggtcctgcaggcggtgtcagcggtccaaggaggcggtacccct
acatcgggttcagatctgggtctaacagctgcatccagccctgtactcagaataatcatc
gacaacatgttctacccagtcactctggatgtgttgcagcagatcttctcaaagttcggc
acggtcatgaagataatcacattcaccaagaacaatcagttccaggcactgctgcagttc
aacgacccatctaccgcacagcaagccaaaattgccctggatggtcagaacatctacaac
tcgtgctgcacgctccgcatcgattactccaagctggtcaacctgaacgtcaagtacaac
aacgacaagagccgtgactacacccggccagagctccctgcaggggacggacagcctgcc
atggaccccaacatggctgctgcctttcaaggcaaggactccaactctctgcttggtaag
atcccaggtgccctgagcccgctgaatgctgcggcggcggcggctgctgctgcagggagg
gtggctctgtctggtcactctggctccagcggcgtgctcctggcctccaacctcaatgaa
gagatggttacgccccaaagtctgtttactctcttcggggtctatggggacacccagagg
gtgaagattctttacaataagaaggacagtgctctgatacagatggccgatgccagtcaa
gcccagctagcgatgagtcacctgaacggtcagaagatgtatgggaaggtcatcagggtg
gctctgtccaagcacacctcagtgcagctgcccagggatggactggatgaccagggcctt
accaaggacttcaccaactcccccctgcaccgcttcaagaagcccggctccaagaacttt
cagaacatcttccctccctccaccaccctccacctctccaacatcccaacggacgtaact
gaagaagacctgagactactgttctccaacgccgggggcactgtgaacgcattcaagttt
ttccaggatcacaaaatggcgctgctccagatgtcgacggtggaagaggccatccagggt
ctgattgacctccacaactacaacatgggtgacaaccaccacctgagagtgtccttctcc
aaatcctccatctaa
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