Salvelinus sp. IW2-2015 (Arctic char): 111973027
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Entry
111973027 CDS
T05762
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111973027
Membrane trafficking [BR:
salp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
111973027
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
111973027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Lgl_C
WD40
CFAP43_N
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
111973027
NCBI-ProteinID:
XP_023855926
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Position
LG14:complement(5411804..5582840)
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AA seq
890 aa
AA seq
DB search
MEHQGPGQAIPDNHPTWKAAQGWERSQSPANPSSKWSTRPLRLGDPFMILSGGLSYDTVG
RRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYSNDFQEPYAVVVLLEKDLVVIDLAQNG
YPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSVGSRQKRQGYSKKEWPISGGNWGL
GTQSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFEKSRNNKEDKQNTEIVDEDP
FAIQIMAWCPESRMLCVAGVSANLIIYRFSKQEITTEVVQLLEVRLQYEVNDMESPPEGG
GGGDRDLPTPGTASPSPQTTGPPTHPSTSSNSSDGVRDNVPCLKVRSTPLKQSSGYQVEL
VVQLVWVSGEPPQQITSLALNSSYGLIVFGNSNGLAVVDYLQKTVLLNLGTVELYGSNDP
YQRQARSPRKTRQPAGGNGLCDINEGSASEDRCKSPTSVLASNHQQFYNGGGGRGAKMSR
KLSLPTELKPDLVLLSVCPPRGANPLDHRDNSFSRSRSSSVTSIDKEAREAITSFHFCET
FARKGDSAITPCLYVGTSLGTVLAVALNLPPAGEQRLLQPVIVLPSGTLARLKGSILRMA
FLDNTGTFLPPAFETWYEPNAAGADSEERDKARKRRPVSVSPSTSQELQESQYAVVCSEK
QAKVIALPSQNCIFKHSITETSFVLRADVVQMNIGNCVACFCANGHIMTLSLPGLRPLLD
VNYLPLTDMRIARTFCFTNLGQAMYLTSPTEIQRITYSQETCENLQEMLGELFTPVETPE
APNRGFFKGLFGGGATSLDREELFGETQAGKASRGLAQHIPGPQGLEGMKGAASGVVADL
ARARIALDERGQKLGELDERTAAMLASADSFGKHAHDMMLKCKDKKWYQF
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggaacatcaagggccagggcaagccattccagacaatcaccccacatggaaagcagcc
caaggatgggaaagaagccagagccctgcaaacccatcctcaaagtggagtacaagacca
ctaagactgggagaccccttcatgatcctgtctggaggtctgtcgtatgacacggtgggt
cggcggccatgtctgacggtgatgcatgggaagagtacagccgtgctggagatggactat
cctatcgtagacttcctcacgctctgtgagacgccatactctaacgattttcaggaacct
tatgctgtagtggtccttctagaaaaggatttagtagtaatcgaccttgcacaaaatggt
taccccatattcgagaacccctatccactgaccatccatgagtctccggttacctgctgt
gagtactttgctgactgccctgtggacctcatacccgcactttactctgttggctccaga
cagaaacgacagggctacagcaaaaaggaatggccaatcagtggtggtaactggggcctc
ggcacacagagctaccctgagatcatcatcactgggcatgctgatgggactgtgaagttt
tgggatgcttctgcaataatgctccaggtactgtacaagctgaagacggccaaggtgttt
gagaagagcaggaataataaggaggacaagcagaacacagagattgtggatgaggacccg
tttgccatccagatcatggcctggtgtcctgagagcaggatgctgtgtgtggccggggtg
tctgccaacctcatcatataccgcttcagcaagcaggagatcaccaccgaggtcgtacag
ctgttggaggtacgtctgcagtacgaggtgaatgacatggagtcccctccagagggggga
ggagggggggaccgtgacctgcccacccccggaacagcctcacccagcccccagaccacc
ggacccccgactcacccctccaccagcagcaactcctctgacggggtccgagacaacgta
ccctgcctcaaggtgcgtagtacccctctgaagcagtcttcagggtatcaggtagagttg
gtggtgcagctggtgtgggtaagtggagagcccccccaacagatcaccagcttggccctc
aactcctcctacggcctgattgtgtttgggaacagtaatgggctggcagtggtggactac
ctccagaagacagtgctgttgaacctggggacagtggagctgtatgggtctaacgatccc
taccagagacaggctcgctctccacgcaagacacgccagcccgccggaggtaatggtctc
tgtgacatcaacgagggttctgcctcggaggaccgctgcaaatcccccacttcagtgttg
gcgtcaaaccatcagcaattctacaatggaggtgggggtagaggagcaaagatgtcacgg
aaattaagcttgcctactgagctaaagccagacttggttctcctgtctgtatgtcctcca
cggggcgccaacccattagaccaccgggacaactccttcagccggtcacgctcctcctcc
gtcacgtccatagacaaggaggcgcgcgaggccatcacctccttccacttctgtgagaca
ttcgcccggaagggggacagcgccatcacaccatgcctgtacgtgggaacctccctggga
acagtgctggctgtggccctcaacctgccccctgctggggaacaaaggctactgcagccc
gttatcgtcttacctagcggtaccctggcgcgactgaagggcagtatcctgaggatggcc
ttcctagacaacacaggaaccttcctcccccctgcctttgagacctggtatgagccaaac
gctgcgggcgccgacagtgaggagcgagacaaggcccgtaaacgccgcccggtctctgtg
tcgccctccacctcccaggagctgcaggagagccagtatgcggtggtgtgctctgagaaa
caggctaaggtcatagcactgccctcacagaactgcatcttcaaacacagcatcacagag
acatcgttcgtcctgagggctgacgtggtccagatgaacatagggaactgtgtggcctgc
ttctgtgctaacggacacatcatgaccctcagtctgccggggctgagaccgttgctggat
gtaaactacctgccactgacagacatgcggatagcccggaccttctgctttaccaacctg
ggccaggccatgtacctcacctcccccactgagatacagaggatcacatacagccaggag
acctgtgagaacctgcaggagatgctgggagaactgttcacaccagtggaaaccccagag
gctcccaaccgaggattcttcaagggcctttttgggggaggagcaacttccctggacaga
gaggaactatttggtgagacgcaggcgggtaaggcgtcccgtggccttgcccagcacatc
ccaggtcctcagggcctggagggcatgaagggggcagcctcgggcgtggtggccgacctg
gcgcgtgcccggatagcactggatgagagagggcagaaactgggcgagctggacgagagg
acggctgccatgttggccagcgccgactcctttggcaaacacgcccatgacatgatgctg
aagtgcaaagacaagaagtggtaccagttctga
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