Salvelinus sp. IW2-2015 (Arctic char): 111973099
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Entry
111973099 CDS
T05762
Name
(RefSeq) transcription factor Sox-11-like
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111973099
Transcription factors [BR:
salp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
111973099
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF3246
Motif
Other DBs
NCBI-GeneID:
111973099
NCBI-ProteinID:
XP_023856085
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Position
LG14:15797679..15799957
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AA seq
367 aa
AA seq
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MVQQTEHSETESSREATDTEESELMACSPVPLKSLKADWCKTATGHIKRPMNAFMVWSKV
ERRKIMEQSPDMHNAEISKRLGKRWKLLKDSEKIPFIREAERLRLQHMADYPDYKYRPKK
KPKLDSSTKPAAHSPEKTNNKPVKAPGKKFVKLKTMKAVTTRPSHDPRYDYVFTSFTTSK
SVKIEYSDEDDDEEDYEEEVFSRIKMEEDEEPIPYNIAKVPASPTLSSTAESEGASMYEE
SRNANAAPNRLFYNFKNITKQNTICPASLSPASSFRSVSTSSSSSEDADDLLVDFSLNLA
SSAHGVELGTSNSGNLSLSLVDKDLDSFSEGSLSSHFDFPDYCTPELSEMIAGDWLDANF
SDLVFTY
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcaaacagaacacagtgagacggagagtagcagagaagctacagacactgag
gagagcgaactgatggcgtgtagcccggtgccactgaaatcattgaaagctgactggtgc
aagacagcaaccggtcacatcaaaagacccatgaatgcatttatggtgtggtcgaaagtc
gagaggagaaagatcatggagcagtctccggacatgcacaacgcggaaatctccaaaaga
ctgggaaagcggtggaaattgttgaaggacagtgaaaagatcccgtttatcagggaagcc
gagagactccggctacaacacatggctgactaccctgactacaagtaccgacccaagaag
aaaccaaagctcgacagttccacaaaaccagccgcgcattcaccggagaagactaacaat
aaacctgtaaaagctccgggtaagaaattcgttaaattaaaaactatgaaggcggtgaca
acgagaccgtctcacgaccctcgttatgactatgttttcaccagttttacaactagcaaa
tctgtaaaaattgaatattctgatgaggatgacgacgaagaggactacgaggaggaagtg
ttctctcggattaaaatggaagaggacgaggaaccaataccgtacaacatcgccaaggtg
cccgcgagccccactctgagctccactgcagagtctgagggcgcgagcatgtacgaggag
tcccggaatgcgaacgcagctcctaacagactgttctacaatttcaagaacattaccaag
cagaacacaatttgccccgcatcactctcaccagcatcttcattcaggtcggtctccacc
tcgtccagttccagcgaagacgccgatgatttactggttgacttcagtttaaatctagcc
tccagtgctcacggagtggagctggggacctcgaattcaggaaatctgtctctttccttg
gtggataaggacttggactctttcagtgagggcagccttagctctcactttgatttccca
gactattgcacccccgaattgagcgaaatgatcgcaggtgattggcttgacgctaacttt
tcagatttggtgtttacctactag
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