Salvelinus sp. IW2-2015 (Arctic char): 111973106
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Entry
111973106 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger E-box-binding homeobox 1-like
KO
K09299
zinc finger homeobox protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111973106
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
111973106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
Homeodomain
zf-C2H2_15
zf-H2C2_5
zf-met
zf-C2H2_6
Zn_SUZ12
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
111973106
NCBI-ProteinID:
XP_023856107
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All DBs
Position
LG14:complement(43663770..43753235)
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AA seq
1215 aa
AA seq
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MADGPRCKRRKQANPRRNNVTNYSNVVKTPGSDSDDEDKLHIVEXDGSLADGADCDSNVP
SEDHNGDRSDEAREECGSDGEDDGRTDALVEEMLQQGDTAVIYPEAPEDEPRQGTPEASG
HDENGTPDAFSQLLTCPYCSRGYKRYTSLKEHIKLRHEKSEDNFSCSQCSYTFAYRTQLE
RHMTAHKAGRDQRHVTQSGGNRKFNCTECEKAFKYKHHLKEHLRIHSGEKPYECSNCKKR
FSHSGSYSSHISSKKCISVISAVNGRPRPSAKASQCPSPAMPASPSSTTRTQIWDKPLQE
QLPLNQIKSEPVDYEYKAMVLSPATTGGNGHGGGVLNGGAVAPLQGAVQAVMLPTMGLVS
PISINLADLQNILKVAVDGNMIRQMLENNAKAAGTGTGATGVPHQQLISAISLPIIGQDG
NATKIIINYSLDPSQTQLTAQNLKKEPQTLATMPGQPLAEAAIEPCSKAQQRLPEDLTLS
RPPRSKEEKMEEENEKEEGEETTKTCLLCDDCPGGLDVLHALEHCKKASGLKINGDKSES
AIASLLSEGVGNQPKNLLSLLKAYFALNAEPTNEELSKISDSVSLPTDVVKKWFDKMQSS
QVSLGAPTPPSEEEGPLSESPGATVVSPKVRSEQDTEGPTMMQSSPAEATPAEVNGSMRS
PASPTPLNLTAGGPVPAKPSSSDSTDGPLDLSLPKPTREEAAAAATYHAAVYSHQDEPLN
LTKTCTTKKELPLACAAGHHVTGQPVSLYTASPQSANPIXIMTTQLPSGTIYAITDQGRA
GMPCLRAVTTSNNQTILIPQLAYTYTTTATANSPAGTETQEKTTLQVNGIKEERQDTSSE
GVSTMEELNDSDSAPSRKKMRKTESGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGI
CRKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKEAQEGSQG
GIGEEVLEEEMESPVGLALGLGGEQQEQSDSRPTSSHLDSDERGSSTREDEEESEEEGEE
EDMETAAGEEVEGDPDRVLDMDDIQVVRIGDEGGDEEDEAEGEKEEDTGREEGENEEEQG
VERVVVGGEGEEGEEEGVVGVEVKEEQEEEEVTGKKADTRQEEVQENREKEEEHEGEKEQ
AEEQVEEELSEKEELSEKEETMDTEKGLTSEDKEESGSRAAEESEVMKENEGETNRNTVS
EDKNQTPTGEKGDPN
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaatccgaggaggaataacgta
accaactacagtaatgtggtgaagacccctggctcagactcagatgatgaggacaagctg
cacatcgtggagngagacgggagtctggcagacggggcagactgtgatagtaatgtgccc
agtgaagatcacaacggagaccgctcagatgaagcgagggaggagtgtggttcagacggg
gaggacgatggcaggacggacgctctggtggaagagatgctgcagcagggagacacggcc
gtcatttacccagaagcgccggaggacgagccacgccaagggacgcccgaggccagcgga
catgacgagaacggcactccggatgcgttctcccagctcctcacctgtccctactgctcc
cgcggctacaagcgctacacgtccctgaaggagcacatcaagctgcgccacgagaagagc
gaggacaacttcagctgctcccagtgcagctacacttttgcctaccgcacacagctggag
agacacatgacggcccacaaagctggtagagaccagaggcacgtgacgcagtcggggggc
aaccgcaaattcaactgcaccgaatgtgaaaaagcatttaagtacaagcaccacctgaag
gagcacctacgcatccacagcggagagaagccgtacgagtgctccaactgtaagaagcgt
ttctcccactcgggctcctacagttcccacatcagcagtaagaagtgcatcagcgtgatc
tcggcagtcaacggccgcccccggcccagcgccaaggcgtcccagtgcccytccccagcc
atgcccgcrtcgccctcctccaccacacgcacacagatctgggataaacctttacaggag
caactacccctcaatcagatcaagagcgagccagttgactatgagtacaaggccatggtg
ttgtctccagcaacgacgggaggaaatggtcatggaggaggggtgttaaacgggggtgcc
gtggcccccctgcagggtgcggtgcaggctgtgatgctccccaccatgggtctggtatct
cccatcagcatcaacctggcagacctgcagaacatcttgaaggtggcggtggacggtaac
atgatcagacagatgttggagaacaacgccaaggcagcggggaccggcacaggggcgacg
ggtgttcctcaccagcagctcatctcagccatcagtctgcccatcatcggtcaggacggc
aacgccaccaagatcatcatcaactacagcctcgatcccagccagacccagctcactgcc
cagaacctgaagaaggaacctcagaccctggctacaatgccaggccagcccctggccgag
gctgccatagagccctgcagcaaagcccagcagagactcccagaggacctgacactcagc
aggccccccaggagcaaagaggagaagatggaagaggaaaacgagaaggaggagggggag
gagaccactaagacctgtctgctctgtgacgactgccccggtggtctggacgtgctccac
gcactcgagcactgtaagaaagcctcaggcctcaagatcaatggggacaaatcagagtcg
gccatcgcctcgttactgtccgagggggtcgggaaccagcccaagaacctcctgtccctc
ctcaaggcctacttcgccttaaacgctgagccaaccaaygaggagctcagcaagatctca
gattcagtcagcctgcccaccgacgtggtcaagaagtggttcgacaagatgcagagcagt
caggtttcactaggagctccgacacctccgtctgaggaagagggacccttgtctgagagt
cctggggccacagttgtgtcccctaaggtaagatcggagcaggacacagagggtcccacc
atgatgcagtccagcccagccgaggccactccggctgaggtcaacggctccatgcgctcc
ccagcctcccccacaccactaaacctgaccgccggggggcccgtcccagccaaaccctcc
tcctcggacagcactgatggccctctggacctgtcgctaccaaagcccacccgagaggag
gccgcagccgccgccacttaccacgccgctgtttactcccatcaggacgaacccctgaac
ttgacgaagacttgcacaacaaagaaagaacttccgctcgcctgcgccgctggccaccac
gtgactggtcaacctgtgtccctgtacaccgccagcccacaaagtgccaaccccatcagm
atcatgaccactcagctgcccagcgggaccatttatgccatcactgaccagggccgtgca
ggcatgccctgcctccgggcagttaccaccagtaacaaccagactatcctcatcccacag
ctggcctatacctataccactacagctacagccaacagccctgcagggacagagacacag
gagaagaccacactgcaggtcaacggcatcaaggaggagcgtcaggacaccagctcagag
ggcgtgtccaccatggaagagctgaacgactcagactctgccccttccaggaagaaaatg
aggaaaacggagagtgggatgtacgcctgcgacctgtgtgacaagatcttccagaagagc
agctctctgctccgacataaatacgaacacacaggcaagcgaccccacgagtgcggtatc
tgcaggaaggccttcaaacacaagcaccacttgatagaacacatgcgtctccactctgga
gagaagccctaccagtgcgacaagtgtggcaagcgcttctctcactcgggctcctactcc
cagcacatgaaccaccgttactcctattgcaagaaagaggcgcaggaaggaagtcaggga
ggtataggggaggaggtgctggaggaggagatggagagccctgtggggttggccctgggc
ctcggaggggagcagcaggagcagtcagacagcaggcccacctcctcccacctggactct
gacgagcgagggagcagcaccagggaggacgaggaggagagcgaggaggagggagaggag
gaggacatggagacagcggcaggggaggaggtggagggggatccggacagagttctggat
atggatgatatacaggtggtgcggataggagacgagggaggggacgaggaggacgaggcg
gagggggagaaggaagaagacactggtcgagaggagggagagaatgaggaagagcaggga
gtggagagagtagtggtggggggtgaaggggaggaaggagaagaagagggagtagtgggg
gttgaagtaaaggaggagcaggaggaagaggaggttacagggaaaaaggcagacacaagg
caagaggaggtacaggagaacagggagaaagaggaggaacatgaaggtgagaaggaacag
gctgaggagcaggtggaggaggagctgtctgagaaggaggagctgtctgagaaggaggag
acaatggacacagagaaaggattgacctcggaggacaaggaagagtcagggtcgagggcg
gcggaggaaagcgaggtcatgaaagagaatgaaggtgaaacaaacaggaacactgtttca
gaagacaagaaccagacaccgacaggagagaaaggtgatccgaattaa
DBGET
integrated database retrieval system
