Salvelinus sp. IW2-2015 (Arctic char): 111973216
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Entry
111973216 CDS
T05762
Name
(RefSeq) transcriptional activator GLI3
KO
K06230
zinc finger protein GLI3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
111973216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111973216
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
111973216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
111973216
NCBI-ProteinID:
XP_023856274
LinkDB
All DBs
Position
LG14:53198363..53381496
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AA seq
1649 aa
AA seq
DB search
METQSQASSAAEKKKKVETIVATKGLSTSADISEKAVASSTTSNEDERLGTLYHHHRERR
NAISTQASTPGIPGSKLGEEPSTSTEERPPLVKKELHSSLPHLADHGLPYRGTLFAMDPR
NGYLDSHYAPPQFFPAFHPPVPIDDRHAQGRYIYDPSPVPPLHVPPSLAGSPAFSDISLI
RISPHRNPSVGAESPFNPPHPYINPYMDYIRSLHSSPSLSMISAARGLSPADAPHTGLTT
AEYYHQMALLAGHRSPYTDLLPSVASTAGATSSALHMEYLQAMESSRFPSPRLTARPSRK
RALPISPLSEHSFDLQTMIRNSPNSLVTILNNSRSSSSTSGSYGHLSAGAISPALSFAYP
PNPVALQMHQQLLGRQTGMVGSGFGHSPPLIHPSPVFTTQRPIPGIPPPGLTPRERSVIS
NDASQTKPTSESAVSSTGEPMHHKRSKIKPDEELPNSGAVSCQDHPDGMTLVKEEGDKDE
SKQEPEVVYETNCHWESCHREFDTQEQLVHHINNDHIHGEKKEFVCRWXECSREKKPFKA
QYMLVVHMRRHTGEKPHRCTFEGCPKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSN
ASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDTYPR
PPPQEGGNGQGLSPGQLGGYADRREYNHSTSKQDECLQVKSIKTEKPMTSQPSPGGQSTC
SSDQSSISTYPSRGVQLALRGGVGLGLGEGLGEYEELEDEEEKVLEELEGGCGAPIMDST
VSTATAATLALQARRSVGRPMRWMEHMKMERLKQVNGGGAPMPRLVPLSPTPKGPATLPA
ILGKDPYLGRLSQPKPPPRPELGSTELTVLSLLHSIERGDRRDSCDSATSSAYLSSSRRS
SGISPCFSSRRSSQASQSEAANTPSHHYRHHNLSSTDSYDPISTDASRRSSDASQCGGGG
GGGGVFVGGGWAGVGGGTKGMLNLTPAQHYYLKAKYAAATGGPPPTPLPNXEXMSLKTRM
AMXGXXQDGXGGNXAXPXLVRXRRCSDGSTTNRYGGHGGYRDYWRRGFYPGEGPGNGPDR
RASDPVRTHPQQAPEFFGLPHVQCFSSLNNIHPLPPLSGLQHPTEKGRSFSLQNYTRSDV
NLQRGGLLSSPCPPSIMENTALEALAMEEEGALLLGDEDMLPDDMVQYLRSQDKAGSYNN
HLENQVAGDNGHLPGGELQDQGPGLNQCFHSPQQHQQRQGLERESPSKDGMPIQWNEVSS
GSAERSPQRQPQAQSQQRCSRWAATEQHQGLAAGSPLGRFGNMVVQPQQPFAREFQNQCC
AQPAQSQPPCGVKLEVTTHSCXEMRGNDHNPTHTFGRPDFSQITLGPLPQGYGQQKYHNQ
TQNHRTSRQIGENLLLSRASMDSLSPALHHQLLAAPAPRLQQANSRHPARPQQYLNLQPS
TTNGSHVNLTHQNISQQQQSLSNQGSHCSLARQVSGLKLEVPDQGYLDQGFSDQAVCFDP
VETKAKSFPPLEEQCLLETMTEQVGLGVDSSVPACLLSPGADQVTSTVDSGVGGSANVLD
DVVTLDFGAMLDNVGLGYDQRSLVSGVISPSIFQGLSRTSSRLTTPRASATFHSTAGMVP
SNLSNMAIGDMSSFLTTLAEESKFLAIMQ
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccagtcccaggccagttctgcagctgagaagaagaagaaggtggagaccatc
gtggcaaccaagggcttgtccacgtccgccgacatcagcgagaaggctgtggcctccagc
acgacatccaatgaagatgagcgattgggcacgctgtaccaccaccaccgcgagaggcgc
aatgccatcagcacccaggcctccacgcctggcatccctggcagcaagctgggtgaggag
ccctccacgtccacagaagagcgccccccactggtaaagaaagagctgcacagctcactg
ccccacctggcggaccacggcctgccctatcgcggaacactgtttgccatggatccccgc
aacggatacctggattcccactacgcaccgccacagtttttccctgctttccatccaccg
gtgcccatcgacgacagacatgcccagggacgctacatctacgacccgtcccctgttccc
cctctacacgtgcctccttcgctggccggcagtccggcgttctccgacatctccctcatc
cggatctcgccccaccggaacccctccgtgggggccgagtcaccctttaacccaccacac
ccctacatcaacccctacatggactacatccggtcacttcactccagtccctcactttct
atgatctctgcagccaggggcctcagccctgcagacgccccgcacacaggcctgactaca
gcagagtactaccaccagatggctctcctggcaggccaccgtagcccctacacggacctc
ctaccctctgtggcctccacggccggagccaccagcagcgccctgcacatggagtatcta
caggccatggagagctccaggttccccagccccaggctgacggcaaggccaagtaggaag
cgggccctgcccatctctcccctgtcggagcacagctttgacctgcagaccatgatccgc
aactcgcccaactcccttgtcaccatcctcaacaactcccgctccagctcctccaccagc
ggctcctacggacacctctcggccggggccatcagtccggcattgagttttgcctaccct
ccgaaccccgtggcacttcagatgcaccagcagctgcttggtcggcaaacggggatggtg
ggttctgggttcggccacagtccgccgctcatccacccctccccggtcttcaccacccag
cggcccatccctggcattcctcctcctggcctcacacccagagagcgctctgtcatctct
aacgacgcctcacagaccaaacccaccagtgagtcagcggtgagcagcacgggggaaccc
atgcaccacaaacgctccaagatcaaaccggatgaggagctacccaactcaggggcagta
agttgccaggaccatccggatgggatgacactggtgaaggaggaaggtgacaaggacgag
agcaagcaggagccagaggtggtgtacgagaccaactgccactgggagagctgccaccgg
gagtttgacacgcaggaacagctagtgcatcacattaacaatgaccacatccacggggag
aagaaggagttcgtgtgtcgctgggamgagtgttcacgggagaagaaacccttcaaggcc
cagtacatgctggtggtccacatgcgcaggcacaccggggagaaaccacaccgatgcacc
tttgagggctgtcccaaggcctactctcgcctggagaacctgaagacccacctgcgctcc
cacacgggagaaaagccgtacgtctgtgaacacgagggctgcaacaaggccttctccaac
gcctcagacagagccaagcaccagaaccgcacacactccaacgagaaaccctacgtgtgt
aagatcccgggctgcaccaagcgctacacagaccccagctccctacgcaagcacgtcaag
accgtgcacgggcccgaggcgcacgttaccaagaagcagcgcggcgacacctacccacga
ccccctccccaggagggggggaatggacagggcctgtcaccagggcagctgggagggtac
gcagaccgaagggagtacaaccactctacctcgaaacaggacgaatgtctgcaggtcaag
tccatcaagacagagaaacccatgacgtctcagccaagccctggcggtcagtctacatgc
agcagtgaccagtcctccatcagcacctatcccagccgtggagtccagcttgctttgagg
ggaggggtgggactaggactgggtgagggactgggagagtacgaggagctggaggatgag
gaggagaaggtgttggaggagttagaagggggctgtggggcccccatcatggactccact
gtgtccacagccacagcggctacgttggcgctgcaggcgaggagaagtgtgggccgaccc
atgagatggatggagcacatgaagatggagaggctgaagcaggtgaatggaggaggagcc
cccatgcccaggctggtccccctgtcacccacacccaagggacctgccacgctgcccgcc
atcctggggaaggatccatacctgggcaggttatcccagccgaagcctccccctcgtccc
gagctgggcagcacagaacttacggtgctcagcttgctccacagcattgagcgcggtgac
cggcgggacagctgtgacagcgccaccagctcggcatacctgagcagcagccggcgctcc
tcgggtatctcgccgtgtttctcgtcgcggcgctccagccaggcgtcccaaagcgaggca
gccaacacccctagtcaccactaccgccaccacaacctcagctccaccgactcctacgac
cccatctctaccgacgcctcacgccgctccagcgacgccagccagtgcgggggaggtggt
ggaggaggaggggtgtttgtgggtggagggtgggcgggtgtcgggggagggaccaagggg
atgctcaacctcacgcctgcgcagcactactacctgaaggccaagtacgctgctgccacg
ggcggcccacccccmacrccgctgcccaacatrgagygcatgagyctgaagacccgcatg
gccatgrtgggcgakgkccargayggmkstggaggcaacyaygcgmtgccccmrctggtc
aggycgcgccgctgcagcgacggcagcaccaccaacaggtacgggggccacggtggctac
cgagactactggcgtaggggcttctaccccggcgagggcccagggaacggcccggaccgg
agggccagcgaccctgtgcggacccaccctcagcaagcaccggagttctttgggctgccc
catgtccagtgcttcagcagcctcaacaacatacaccctctgccccctctatcaggcctc
cagcaccccacggaaaagggccgcagcttcagtctgcagaactacacgcgctccgacgtg
aacctacagagagggggcctgctctcctcgccctgcccccccagcatcatggagaacaca
gccctggaggccctggccatggaggaagagggagccctgctgctgggggatgaggacatg
ctgcctgacgacatggtgcagtacctccgctcacaggacaaggcaggctcctacaacaac
cacctggagaaccaggtggctggggacaatggccatctcccagggggggagttacaggac
cagggcccagggctgaaccagtgcttccacagcccccagcagcaccaacagcggcaggga
ctggagagagagagccctagtaaagacggcatgcccatccagtggaatgaggtgagctca
gggagcgctgagaggtctccacagagacagccccaggcccagtcccagcagaggtgtagt
cgatgggccgccacagagcaacatcaaggtctggctgccggttcgccattagggaggttt
gggaacatggtagtgcagccgcaacaacctttcgccagagagttccagaaccaatgctgt
gcccagccagcccagtcccaacctccatgcggggtaaagttagaggtgaccacccactcc
tgcatkgagatgagagggaatgaccacaaccccacacacacctttggccgccctgacttc
tcccagatcaccctggggcctctgccccagggctacggccagcagaagtatcataaccag
acccagaaccacagaacctccaggcagatcggagaaaacctgctcctcagccgggcctcc
atggacagcctctccccggcactccaccaccaactcctggccgcccccgccccccgccta
cagcaggccaacagtaggcacccggccagaccacagcaatacctgaatctccaaccgagc
accaccaacggtagccatgtcaaccttacccatcagaacatttcccagcagcagcagagt
ctgagcaaccaaggcagccactgctccctggcccgtcaggtgtccgggctgaagctggag
gttcctgaccagggctacctggaccagggcttcagcgaccaggctgtgtgctttgacccg
gtggagaccaaggccaagtccttccctcccctagaggagcagtgtctgctggaaaccatg
accgagcaggtgggtctaggcgtggactcctcggtcccggcctgcctactatctccgggt
gccgaccaggtgaccagtacggtggacagtggcgtgggcggctcagccaacgtgctagac
gacgtggtgacgctggacttcggcgccatgctggataatgtggggttgggctacgaccag
cgtagtctggtatcgggggttatcagcccctccatcttccaaggcctgtccaggacctcg
tcccgcctcaccactccccgggcctccgccaccttccacagcaccgcgggcatggtgcct
tccaacctcagcaacatggccatcggggacatgagctccttcctcaccaccctcgccgag
gagagcaagttcctggccatcatgcagtaa
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