Salvelinus sp. IW2-2015 (Arctic char): 111973296
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Entry
111973296 CDS
T05762
Name
(RefSeq) claudin-11 isoform X1
KO
K06087
claudin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03272
Virion - Hepatitis viruses
salp04382
Cornified envelope formation
salp04514
Cell adhesion molecules
salp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
111973296
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111973296
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111973296
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111973296
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
salp03037
]
111973296
04147 Exosome [BR:
salp04147
]
111973296
04515 Cell adhesion molecules [BR:
salp04515
]
111973296
Cilium and associated proteins [BR:
salp03037
]
Other cilia and associated proteins
Stereociliary proteins
111973296
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
111973296
Exosomal proteins of colorectal cancer cells
111973296
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
L1 family
111973296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
111973296
NCBI-ProteinID:
XP_023856385
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All DBs
Position
LG14:complement(32463539..32467189)
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AA seq
239 aa
AA seq
DB search
MAHVCRQLSGSVASFAGWVGIIIATATNDWVRTCDYTVTTCVRMDELGARGLWAECVISP
SLYHCVTLNHILTLPGIAVISLYLSPPPPAYIQTCRALMVCGCLMGLPAMGLVLMSMPCV
RLGDEIPATKLRHGMVGGALTFIVALCGLVSTIWFPIGAHAEEGLMSFGISLYTGWVGSA
LCLLGSFMILCCCGDNPSATPQRQQNSYYYSRQAGGADTPINLAATAVVTGNHAKSAHV
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcacatgtgtgcagacagctgagtgggagcgtggccagctttgcaggctgggtaggt
atcatcatcgccacggccaccaacgactgggtgcgcacctgcgactacactgtcaccacc
tgtgtgcgcatggacgagctgggcgcgcgaggcctctgggcagagtgtgtcatctctccc
tcactctaccactgtgtcacgctcaaccatatcctcacactgccaggtatcgctgtgatc
tctctctacctctcccctccccctccagcatacatccagacatgccgtgcgttgatggtg
tgtgggtgcctaatggggcttcctgcgatggggctggtgctgatgtccatgccctgtgtc
agactcggagatgagatccccgctaccaaactacgccacggcatggtcgggggtgctctc
acctttatcgtggctctctgtggattggtgtcgaccatctggtttcctattggtgctcac
gcagaagagggtctgatgtcattcggcatctcactgtacaccggatgggtcggctccgcc
ctctgcctcctggggagcttcatgattttgtgttgctgcggtgacaacccctcggcaacc
ccccaaaggcagcagaacagctactactactccagacaggcagggggcgccgacacaccc
atcaaccttgccgctaccgccgtagtcacgggcaaccacgccaagagcgcacatgtataa
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