Salvelinus sp. IW2-2015 (Arctic char): 111973407
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Entry
111973407 CDS
T05762
Name
(RefSeq) carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X1
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
salp01009
]
111973407
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
111973407
Enzymes [BR:
salp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
111973407
Protein phosphatases and associated proteins [BR:
salp01009
]
HAD phosphatases
Fcp/Scp phosphatases
111973407
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
111973407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
Motif
Other DBs
NCBI-GeneID:
111973407
NCBI-ProteinID:
XP_023856534
LinkDB
All DBs
Position
LG2:5325395..5358430
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AA seq
338 aa
AA seq
DB search
MPDGIEFNGDQTDSSTTSSEEIDEQNKSYEICEQLNTPYLYQNWEEHNGVSEHLQRPESE
DLSEQVSEKTSLPLDGAEHSKDSIDREPLAHHAEPTEPSEQSELDEKMQLHEFFKIVASE
QLSEESEEELSDDESFESCECEYCVPPREQVPAKPLLPQLKSQDSGKICVVIDLDETLVH
SSFKPVNNADFIIPVEIDGTVHQVYVLKRPNVDEYLKRMGELFECVLFTASLSKYADPVS
DLLDKWGAFQHRLFRESCVFHQGNYVKDLSRLGRDLNQVIIVDNSPASYIFHPDNAVPVT
SWFDDMADTELLDLIPFFERLSKVEDVYDILKQQRNAS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatggtattgaattcaatggggatcaaactgattcctccacaacctcttccgaa
gagatagatgagcaaaacaagtcatatgagatatgtgagcaactaaacacaccatatctg
tatcagaactgggaggaacacaatggcgtctcagagcatctccaacgcccagagtcagag
gacctttcagagcaggtgtctgagaaaacaagcctccctcttgatggtgctgaacatagt
aaagactccatagaccgcgagccacttgcacatcacgccgaaccaacagagccctctgaa
caaagtgagctggatgagaaaatgcagttgcatgaattctttaagattgtggcctctgaa
caactaagtgaggagtctgaggaggagctgagtgacgatgagtcctttgagtcctgtgaa
tgcgagtactgcgtcccgcctagagaacaggtcccggcaaaacctctgctacctcaactc
aagtcacaagactcagggaagatctgtgtggtgattgatttggatgaaacattagtgcac
agttcattcaagcctgtgaacaatgctgattttatcattccagtggaaattgatggaaca
gttcaccaggtgtacgtgttgaagcgacccaatgtggatgagtatctcaaaagaatgggg
gagttgtttgagtgtgttctgttcactgccagtttatccaagtatgccgatccagtctcc
gacctgctggataaatggggtgccttccaacaccgtctcttccgggagtcctgcgtgttc
caccaaggaaactatgttaaagacctgagtcggctgggcagggacctcaaccaagtcatc
attgtagacaactccccagcctcctacatcttccaccctgataatgctgtccccgtaaca
tcctggttcgacgacatggccgacacagagctactagatctcatcccgttcttcgagaga
ctaagcaaagtggaagatgtctacgatattctcaagcagcagaggaatgcaagctag
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