KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111973423
Entry
111973423         CDS       T05762                                 
Symbol
gen1
Name
(RefSeq) flap endonuclease GEN homolog 1
  KO
K15338  holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:salp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:salp03400]
    111973423 (gen1)
DNA repair and recombination proteins [BR:salp03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     111973423 (gen1)
SSDB
Motif
Pfam: XPG_I Chromo_2 XPG_N
Other DBs
NCBI-GeneID: 111973423
NCBI-ProteinID: XP_023856557
LinkDB
Position
LG14:complement(9243072..9249635)
AA seq 957 aa
MGVHDLWSILGPVRESVPLYSLTGKTLAVDLSLWVCEAQHVQAMMGKVTKPHLRNLFFRI
SSLTLMGVKLIFVMEGEAPKLKAETMSKRTDMRFGGFDKSAPKKQTTKTTNRGRFNAVLR
ECAEMLDCLGVPWVTAAGEAEAMCAFLDAQGLVDGCITNDGDAFLYGAQTVYRNFNMNTK
DPQVDCYRTSRVETELQLARETLVGLAILLGCDYIPKGIPGVGKEQALKLIQTLKGQTLL
QRFSQWREEGVVAPEWVLKKVPHCHLCHHPGSAKAHERSGCVLCDSKHFCEPQDYDYQCP
CHWHCCEQTRQASSTDASIRKKTLASDKFPFTEIINEFLVDKDKPVHNFKRRKPNMLLMQ
NFAYNKMEWPKHYTSEKVLVLMTYTELMNRKHGRATSSLIKPLRIWKPRVRNAIASFEII
WSKPDHYVFSEDHPEDSQDEVRTVEEEALFRLAYPHVVELYLREKAENKTKKKKPKGKKD
HCDVSDLLAKMSLHSSTADNNTQQPSAAAAALTITTSNNSVLVLEGPESPKKHLDPGKDH
PRLEVRLGAQTQEVMSPPSFTSSGKIPEAAASPSVSMVMDALHLSDIDWESFTSSPPPQA
AGARTATDPKSLQTTNDSVEETITKLGPSTDLRAAMAVPGPCYAECSLRDRVLMRNTCKS
VNMADNDDVTTIHVNSQSAAPLDLIDSNKSGPKPMALIPIKSSNDSKPSEQLLVCGMKAT
LVDKDQSIALPHKPRPAHHSSKPISLNSTQTGPVTATQTQGAKQHGAGEPKSPQKYRFVK
KAISSSALPQRSHSKPSDTQPGRDDRNMKSHQQTKKSVCASVCSSSEDSDTENQCRGGGQ
SRAKVKPKSRPRCQYLTDYSLKPTSKPSTSTKAAWDTVTAQPLRPRAVSASMGEQPILGS
SVSTIGKCQDVPPIRVDDIVFIPSPVSPVTMSDGDDSVICSKSPLPLAERVKLKFLK
NT seq 2874 nt   +upstreamnt  +downstreamnt
atgggtgtgcacgacctgtggtccattctggggccggttcgggagtcggtgccgttgtac
agcctcaccggaaagaccctggccgtggaccttagcctgtgggtctgcgaggcccagcac
gtccaagcaatgatggggaaagtcaccaaacctcacctccggaatctgtttttcagaatt
tcctctctcacactgatgggggtaaagctaatttttgtcatggagggagaggcccccaaa
ctcaaagcagagactatgagcaagaggacagacatgagatttggggggtttgacaagtca
gcccctaaaaaacaaactacaaagaccaccaacaggggtcgcttcaatgctgtgctgaga
gagtgtgcagagatgctggactgtctgggtgtcccctgggtgacagcagcaggggaggct
gaggccatgtgtgcctttctggatgcccagggcctggtggacggctgcatcaccaacgat
ggggacgcttttctctacggagcgcagaccgtctacagaaacttcaacatgaacaccaag
gatccacaggtggattgttacaggacttctagggtggagacagagctgcagctagccagg
gagacgctcgtgggtctggccattcttctgggctgtgattacattcctaagggtatacca
ggagttgggaaagagcaagctctaaaactcatacagacattgaaaggacaaacactttta
caaagattcagccagtggagggaggagggtgtggttgcgccagagtgggtcctaaagaag
gtccctcactgccatttgtgtcaccatcctgggtcagccaaggctcacgagcgcagtggc
tgtgtgttgtgtgacagcaagcacttctgtgagcctcaagactatgactaccagtgtcct
tgtcactggcactgctgtgagcagacacgacaggcctcttcaacagatgccagcatcagg
aagaaaacactggcaagtgataaattcccttttacagagatcataaatgaatttctggta
gacaaagacaagcctgtccacaatttcaaaaggaggaaaccgaacatgctattaatgcag
aactttgcgtacaataagatggagtggcctaagcactataccagtgagaaggttctggtc
ctgatgacgtacactgagctgatgaacagaaaacatggaagagcgacgtcgtctctgata
aaacctctacgtatatggaagccaagagtaaggaatgcaatcgccagctttgaaatcatc
tggagtaagccagatcactatgtgttttctgaggaccaccctgaggacagccaggacgag
gtgaggacggtggaggaagaggctctgttccgcctggcctacccacacgtggtggagctg
tacctcagggagaaggctgagaacaagaccaagaagaagaaaccaaagggtaagaaagat
cactgtgatgtttctgacctcctggccaagatgtctttgcacagttccactgctgacaac
aacacccaacaaccctctgctgcggcagcagcactgaccattacaacaagtaacaactca
gtgttggtcctggagggtccagagtctccaaaaaagcatctggatcctggtaaagaccat
ccccgcttagaagtacgtcttggagctcagacacaggaagtgatgtcacctccgtctttc
acttcctctgggaagattccagaagcagcggcctctccgtctgtttccatggtgatggat
gctcttcacctgagtgacatcgactgggagtcattcacgtcctccccgcccccgcaggct
gctggcgctcgcactgccactgaccccaagtcactccaaaccacaaatgatagtgtcgaa
gaaactatcacaaaactgggcccctctactgatctcagagcagcaatggccgtaccaggg
ccatgttatgcagagtgttcgctgagggacagggtcctaatgagaaacacctgcaagtct
gtgaacatggcagacaatgatgatgtcaccaccatacacgtaaactcccagtcagcagca
cccctggatttaattgattctaacaagagtggccccaagccaatggcactgatacccatt
aaaagcagcaatgattccaagccatcagaacagctgctggtgtgtggcatgaaagccaca
cttgttgataaggaccagagcattgcattgccccataagcctcgacctgctcatcacagc
tcaaaacctatctcattgaactcaacacaaacaggcccagtcacagcaacacaaacacaa
ggggctaaacaacatggtgccggtgaaccaaagtctccacagaagtacagattcgtaaag
aaggccatatcttcttccgctctgccacaaaggagccactctaaacctagcgacacacag
cctggtcgggatgacaggaacatgaagtcacatcaacaaaccaagaagagtgtgtgtgcc
agtgtgtgttcatcgagtgaggacagtgacacagagaaccagtgtcggggaggagggcag
agcagggccaaagtcaaacccaaaagcaggcccaggtgccaatacctcacagactactca
ctgaaacccacctccaaacccagcacctctacaaaggcagcctgggacacagtgacagcc
caacccctcaggcctagagctgtgtctgccagtatgggtgaacaaccaatactaggcagc
tctgtgtctaccatagggaagtgccaggatgttcctccaattagagttgatgacattgtg
ttcattccaagccctgtttccccagtgactatgtctgatggtgatgactcagtgatttgc
agcaagagcccactgccattggcagagagggtgaagctgaagttcctgaaatga

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