Salvelinus sp. IW2-2015 (Arctic char): 111973423
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Entry
111973423 CDS
T05762
Symbol
gen1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salp03400
]
111973423 (gen1)
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
111973423 (gen1)
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
111973423
NCBI-ProteinID:
XP_023856557
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Position
LG14:complement(9243072..9249635)
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AA seq
957 aa
AA seq
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MGVHDLWSILGPVRESVPLYSLTGKTLAVDLSLWVCEAQHVQAMMGKVTKPHLRNLFFRI
SSLTLMGVKLIFVMEGEAPKLKAETMSKRTDMRFGGFDKSAPKKQTTKTTNRGRFNAVLR
ECAEMLDCLGVPWVTAAGEAEAMCAFLDAQGLVDGCITNDGDAFLYGAQTVYRNFNMNTK
DPQVDCYRTSRVETELQLARETLVGLAILLGCDYIPKGIPGVGKEQALKLIQTLKGQTLL
QRFSQWREEGVVAPEWVLKKVPHCHLCHHPGSAKAHERSGCVLCDSKHFCEPQDYDYQCP
CHWHCCEQTRQASSTDASIRKKTLASDKFPFTEIINEFLVDKDKPVHNFKRRKPNMLLMQ
NFAYNKMEWPKHYTSEKVLVLMTYTELMNRKHGRATSSLIKPLRIWKPRVRNAIASFEII
WSKPDHYVFSEDHPEDSQDEVRTVEEEALFRLAYPHVVELYLREKAENKTKKKKPKGKKD
HCDVSDLLAKMSLHSSTADNNTQQPSAAAAALTITTSNNSVLVLEGPESPKKHLDPGKDH
PRLEVRLGAQTQEVMSPPSFTSSGKIPEAAASPSVSMVMDALHLSDIDWESFTSSPPPQA
AGARTATDPKSLQTTNDSVEETITKLGPSTDLRAAMAVPGPCYAECSLRDRVLMRNTCKS
VNMADNDDVTTIHVNSQSAAPLDLIDSNKSGPKPMALIPIKSSNDSKPSEQLLVCGMKAT
LVDKDQSIALPHKPRPAHHSSKPISLNSTQTGPVTATQTQGAKQHGAGEPKSPQKYRFVK
KAISSSALPQRSHSKPSDTQPGRDDRNMKSHQQTKKSVCASVCSSSEDSDTENQCRGGGQ
SRAKVKPKSRPRCQYLTDYSLKPTSKPSTSTKAAWDTVTAQPLRPRAVSASMGEQPILGS
SVSTIGKCQDVPPIRVDDIVFIPSPVSPVTMSDGDDSVICSKSPLPLAERVKLKFLK
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgcacgacctgtggtccattctggggccggttcgggagtcggtgccgttgtac
agcctcaccggaaagaccctggccgtggaccttagcctgtgggtctgcgaggcccagcac
gtccaagcaatgatggggaaagtcaccaaacctcacctccggaatctgtttttcagaatt
tcctctctcacactgatgggggtaaagctaatttttgtcatggagggagaggcccccaaa
ctcaaagcagagactatgagcaagaggacagacatgagatttggggggtttgacaagtca
gcccctaaaaaacaaactacaaagaccaccaacaggggtcgcttcaatgctgtgctgaga
gagtgtgcagagatgctggactgtctgggtgtcccctgggtgacagcagcaggggaggct
gaggccatgtgtgcctttctggatgcccagggcctggtggacggctgcatcaccaacgat
ggggacgcttttctctacggagcgcagaccgtctacagaaacttcaacatgaacaccaag
gatccacaggtggattgttacaggacttctagggtggagacagagctgcagctagccagg
gagacgctcgtgggtctggccattcttctgggctgtgattacattcctaagggtatacca
ggagttgggaaagagcaagctctaaaactcatacagacattgaaaggacaaacactttta
caaagattcagccagtggagggaggagggtgtggttgcgccagagtgggtcctaaagaag
gtccctcactgccatttgtgtcaccatcctgggtcagccaaggctcacgagcgcagtggc
tgtgtgttgtgtgacagcaagcacttctgtgagcctcaagactatgactaccagtgtcct
tgtcactggcactgctgtgagcagacacgacaggcctcttcaacagatgccagcatcagg
aagaaaacactggcaagtgataaattcccttttacagagatcataaatgaatttctggta
gacaaagacaagcctgtccacaatttcaaaaggaggaaaccgaacatgctattaatgcag
aactttgcgtacaataagatggagtggcctaagcactataccagtgagaaggttctggtc
ctgatgacgtacactgagctgatgaacagaaaacatggaagagcgacgtcgtctctgata
aaacctctacgtatatggaagccaagagtaaggaatgcaatcgccagctttgaaatcatc
tggagtaagccagatcactatgtgttttctgaggaccaccctgaggacagccaggacgag
gtgaggacggtggaggaagaggctctgttccgcctggcctacccacacgtggtggagctg
tacctcagggagaaggctgagaacaagaccaagaagaagaaaccaaagggtaagaaagat
cactgtgatgtttctgacctcctggccaagatgtctttgcacagttccactgctgacaac
aacacccaacaaccctctgctgcggcagcagcactgaccattacaacaagtaacaactca
gtgttggtcctggagggtccagagtctccaaaaaagcatctggatcctggtaaagaccat
ccccgcttagaagtacgtcttggagctcagacacaggaagtgatgtcacctccgtctttc
acttcctctgggaagattccagaagcagcggcctctccgtctgtttccatggtgatggat
gctcttcacctgagtgacatcgactgggagtcattcacgtcctccccgcccccgcaggct
gctggcgctcgcactgccactgaccccaagtcactccaaaccacaaatgatagtgtcgaa
gaaactatcacaaaactgggcccctctactgatctcagagcagcaatggccgtaccaggg
ccatgttatgcagagtgttcgctgagggacagggtcctaatgagaaacacctgcaagtct
gtgaacatggcagacaatgatgatgtcaccaccatacacgtaaactcccagtcagcagca
cccctggatttaattgattctaacaagagtggccccaagccaatggcactgatacccatt
aaaagcagcaatgattccaagccatcagaacagctgctggtgtgtggcatgaaagccaca
cttgttgataaggaccagagcattgcattgccccataagcctcgacctgctcatcacagc
tcaaaacctatctcattgaactcaacacaaacaggcccagtcacagcaacacaaacacaa
ggggctaaacaacatggtgccggtgaaccaaagtctccacagaagtacagattcgtaaag
aaggccatatcttcttccgctctgccacaaaggagccactctaaacctagcgacacacag
cctggtcgggatgacaggaacatgaagtcacatcaacaaaccaagaagagtgtgtgtgcc
agtgtgtgttcatcgagtgaggacagtgacacagagaaccagtgtcggggaggagggcag
agcagggccaaagtcaaacccaaaagcaggcccaggtgccaatacctcacagactactca
ctgaaacccacctccaaacccagcacctctacaaaggcagcctgggacacagtgacagcc
caacccctcaggcctagagctgtgtctgccagtatgggtgaacaaccaatactaggcagc
tctgtgtctaccatagggaagtgccaggatgttcctccaattagagttgatgacattgtg
ttcattccaagccctgtttccccagtgactatgtctgatggtgatgactcagtgatttgc
agcaagagcccactgccattggcagagagggtgaagctgaagttcctgaaatga
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