Salvelinus sp. IW2-2015 (Arctic char): 111973445
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Entry
111973445 CDS
T05762
Name
(RefSeq) left-right determination factor 2-like
KO
K04668
left-right determination factor
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111973445
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
salp04052
]
111973445
Cytokines and neuropeptides [BR:
salp04052
]
Cytokines
Transforming growth factors (RSTK binding)
111973445
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Motif
Other DBs
NCBI-GeneID:
111973445
NCBI-ProteinID:
XP_023856579
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All DBs
Position
LG14:complement(2180339..2182206)
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AA seq
360 aa
AA seq
DB search
MMDFLRACVLCAAALFTVSKAFTHTDMKDALLQKLGLDEVPKIHKRDLENLVIPAHIKNK
YLSMLKLHHERRRRSLPSLAGILRGIPGNADIYGEFVYSDTTRQRMVFDMDTRIPHNSEV
TMAELKLYKKAPPHKRSMPEKRNHRPVNNARVSIYWVQMLENGSNTTSLVDSRLIPIHET
GWISFDVTQGVHYWSKTQQKTPMNLEVWIEGERPGSYAAEMAKSVHFTTQDQTENTLGKP
ELILYTLNLEEFGSRGDCEINPDKDTCCREKYFINFRALTWTQYWIIEPAGYQAYRCAGG
CKQPKRNYGYGERKCTIAESAPLPMMYLVKKGDYTEIEVAEFPNMIVESCACTMDNISIV
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgatggattttctccgtgcttgcgttttgtgtgctgcagctttattcaccgtctccaaa
gctttcacgcacacggacatgaaggatgccctgcttcaaaaacttggactggatgaagtt
ccgaaaattcacaaaagggatttggagaatcttgtcattcctgcgcacattaagaataaa
tacctgtcaatgctgaagctgcaccacgaaaggcggcgcaggtctctgccaagcttggcg
gggattctgaggggaatcccaggaaatgcagacatctatggggagtttgtgtactcggac
accactcggcaacggatggtctttgacatggacacccgcatcccccataatagcgaggtg
accatggccgaactgaaactgtacaagaaagcccctcctcacaagcgctccatgccggag
aagaggaaccaccgtccggttaacaacgccagagtctccatctactgggttcagatgctg
gagaacggctccaacacaacatctctggtggactcacggttgatccccatccatgagact
ggctggataagctttgatgtcacccagggtgtgcactattggtcaaagacgcagcagaaa
acacctatgaacctggaggtgtggatcgagggcgagagacctggcagctacgcggcagaa
atggccaagagtgtccactttaccacccaggaccagacggaaaacaccttgggaaaacct
gaactgatcctatacacactcaacctcgaagagtttgggtctcgaggtgactgtgaaatc
aatccagataaggacacgtgctgcagagaaaaatacttcatcaatttccgcgcgctcacg
tggacccagtattggataatcgaacccgcgggctaccaggcctaccgatgcgctgggggg
tgcaagcagcccaagcgcaactacggctacggggagcggaagtgtaccatcgcggagagc
gcaccgctgcccatgatgtacctggtcaagaagggcgactacacggagatagaagtggcc
gagttccccaacatgatcgtggagtcgtgtgcctgcaccatggacaacatctccatagtt
tga
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