Salvelinus sp. IW2-2015 (Arctic char): 111973577
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Entry
111973577 CDS
T05762
Name
(RefSeq) sex-determining region Y protein-like
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111973577
Transcription factors [BR:
salp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
111973577
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Ortholog
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Chlor_dismutase
Motif
Other DBs
NCBI-GeneID:
111973577
NCBI-ProteinID:
XP_023856721
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Position
LG14:51638146..51639287
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AA seq
317 aa
AA seq
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MYFDRIPPHSDLCTTKAMFESDEFCGTSSQSEQMSEAQSLGSVPSCHLSVNSDSSCSSPE
PKPLAEPRVRRPLNAFIIWTKEERRRLAKLNPELENKELSKMLGKTWKAMSLAEKRPYMQ
EAECLRVQHTIDHPKYKYRPRRKKQLKKGPKALPVEALVPLNYLIQNQCHQQQAYPNPAI
YPNSQAYFSHMPETYPNRSNYPDPSSTFPNKLLEYSNTGTYPAEPHPYYSTQHGLQQCEA
PSPAYAVSHWEQGDFMVQGLQLFSSTDLSLEFYLEQIHLDMLYDLDRSEFEQYLSPPPCR
PEPMEYSYHQQGSLREA
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtactttgatcggatccccccacattccgatctttgcacaacgaaagccatgtttgaa
agcgacgagttttgcggtacgtcttcccagagtgagcagatgtccgaggcgcaatccctc
ggctctgtaccatcttgtcatctctcggtcaactccgactccagctgctctagtcctgag
ccgaaaccattggcagaaccacgggtcagaaggccgctgaacgcctttattatctggacc
aaggaggagcgcagacgccttgccaaactcaaccctgaactagagaacaaagaactcagc
aaaatgctcggtaaaacttggaaggccatgtctctggcagagaagcggccctacatgcag
gaagcagagtgcctgagagtacagcacaccatcgaccaccccaagtacaagtaccggccc
cgcaggaagaagcagctgaagaagggccccaaagccctacctgtggaggccctggtccct
ctcaactacctaatccaaaaccagtgccaccagcagcaagcctacccaaacccagccatc
tacccaaactcccaggcatacttctcccatatgcccgagacctacccaaacaggtccaat
tacccagacccatcatccacattccctaacaagcttctagaatactctaacacagggaca
tacccagcagagcctcatccatactactctacccagcatgggctgcagcagtgtgaggcc
cccagcccagcctatgctgtgtctcattgggagcagggggacttcatggtccagggcctc
cagctgttctcctccactgacctctctctggagttctatctggagcagattcacctagat
atgctgtatgatctggaccgcagtgagtttgaacagtacctgagcccgcccccatgtagg
cctgagccaatggagtacagttatcaccagcaaggcagcctacgggaggcctga
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