Salvelinus sp. IW2-2015 (Arctic char): 111973685
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Entry
111973685 CDS
T05762
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00061
Fatty acid biosynthesis
salp00071
Fatty acid degradation
salp01100
Metabolic pathways
salp01212
Fatty acid metabolism
salp03320
PPAR signaling pathway
salp04146
Peroxisome
salp04216
Ferroptosis
salp04920
Adipocytokine signaling pathway
Module
salp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
111973685
00071 Fatty acid degradation
111973685
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
111973685
09143 Cell growth and death
04216 Ferroptosis
111973685
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
111973685
03320 PPAR signaling pathway
111973685
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
salp01004
]
111973685
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111973685
Enzymes [BR:
salp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
111973685
Lipid biosynthesis proteins [BR:
salp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
111973685
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of breast milk
111973685
Exosomal proteins of breast cancer cells
111973685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
111973685
NCBI-ProteinID:
XP_023856834
LinkDB
All DBs
Position
LG15:complement(21476202..21495309)
Genome browser
AA seq
717 aa
AA seq
DB search
MHFQEWLQSLRTSGGVRGPVNKDFWSLVPFLPLSSSFSFSSLSLSPSSLLGIGALASFTA
YWLVTRPRPMRPPCDLNAQSIPVQGEPNWRRSALLKDDVLLEFYYXDIRTAYDMFQRGLR
VAGDGPCLGFRKPGEPYQWISYTEVAEQAQVLGSGLLGKGCQPKPEQLVGIFXQNRPEWI
ISELACYTFSMAVVPLYDTLGEEAMVHILNLAEISLVICDKEEKAESLLGNKEKGVTPTL
SCLVLFNPCSDAIVERGKNCGVEILELTQLMELGRQNLRDPAPPQPQDLAVVCFTSGTTG
KPKGAMITHGNIASNSSSVIKILEGSFVIQQEDVSISYLPLAHMFERMIQVSMLCHGARV
GFYQGDISLLMDDIKTLKPTFFPVVPRLLNRIYDKILGSVTSPLRRAVLHYAVRRKQAEL
SSGVVRNNSLWDWLVFNRIQANLGGNLRFILTASAPIAPTVLSFLRATLGCLIFEGYGQT
ECTAGCTFSMPGDWSAGHVGAPLPCAMVKLIDIPDMNYYAKNGEGEICIRGHSVFRGYLK
DEEKTTEALDSDGWLHSGDVGQWLPNGTLRIIDRKKHIFKLSQGEYIAPEKIENVYMRCV
PVLQVFVHGDSLQSHLIGIVVPDPEVFIDWVKERGIFGSYEELCQNPDVKKEVLEDMTAV
GKEAGLKSFEQVKDLHLHPEMFSVSNGLLTPTLKTRRVDIHRVFQEQITNMYSTTAI
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgcattttcaggagtggttacaatcccttcgtaccagtgggggggttcgaggacctgta
aacaaagacttctggagccttgtcccctttctccctttgtcgtcctctttctccttctcc
tccctctctctatccccgtcctctctgctgggtataggtgctctggcctccttcactgca
tactggctggtgactcgccctcggcccatgcgccccccttgtgatctgaatgcccagtct
atccctgtacagggagagcccaattggaggcgttcagctttgctcaaggacgatgtcctg
ttggagttctactatgktgacatcaggacagcctatgacatgttccagagaggactgaga
gtggcaggggatggcccatgccttggcttcaggaaacctggggagccttaccagtggatc
tcctacactgaggtggctgaacaggcacaggtgctgggctctgggcttttgggcaaaggc
tgccaaccaaaacctgagcagttagttggaatatttmcccagaacaggccagagtggatc
atttcagagctggcctgctacaccttctctatggctgtggtgcccctgtatgacacactt
ggagaggaggccatggtgcatatcctcaacctggctgagatctccctggtgatctgtgac
aaggaggagaaggcagagtcccttctggggaataaggagaagggtgtgacgcctactctc
tcctgtctggtgctcttcaatccctgcagtgatgccatagtggagagggggaagaactgt
ggagtggagattctagaactcacacagctcatggaacttggacgacagaacctcagagat
cctgcgccaccccaaccccaggacctggcagtcgtgtgcttcaccagtggaaccacagga
aagcccaagggagccatgatcacccacggcaacatcgcctccaattcctcctctgttatt
aagatcctggaggggtcatttgtaattcagcaagaggacgtgtccatatcttacctgcct
cttgcccacatgtttgagaggatgattcaggtgtccatgctatgtcatggggccagggta
ggattctaccagggggatatctccctgctcatggacgatattaagactctgaaacccacc
ttcttcccagtggtgcctcgcctactcaaccgcatctacgacaagatcttaggctcrgtg
acgtccccattacgccgggcagtgctgcactatgcagtgaggaggaagcaggctgagctc
agcagtggggtggtacgtaacaacagtctgtgggactggctggtgttcaacaggattcag
gctaatttaggaggtaatctgaggttcatcctgaccgcctctgcgcccatcgcccccacc
gtgctctccttcctcagggccaccctcggctgtctgatcttcgagggctacgggcagact
gaatgcacagcaggctgcaccttctccatgccaggtgactggagtgcaggccatgttggt
gctccattgccctgtgccatggtgaagttgattgacattcctgatatgaactattatgcs
aagaacggagaaggagagatctgtatccgtggccacagtgtgttccggggatacctgaaa
gatgaggagaaaacaacagaagccctggacagtgatggctggctgcacagtggagacgtg
ggccagtggctaccgaatgggacacttcgcatcatcgacaggaagaagcacatcttcaag
ctgtcccagggagagtacattgcccctgagaagattgagaatgtctacatgcgttgtgtc
cctgtgctacaggtctttgtgcacggagacagcctacagtctcacctgatcggtattgtt
gtgccagacccagaagtgttcattgactgggttaaggagaggggaatctttggatcctat
gaggaactctgccagaatccagatgtgaagaaagaagtgttagaagacatgacagccgtg
gggaaggaagctgggctgaagtcatttgagcaggtgaaggatctgcacctgcatccagag
atgttcagtgttagcaacggtctcctcacccccactctgaagaccagacgagtggacatc
cacagggtcttccaggaacagatcacaaacatgtatagcacaacagccatctag
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