Salvelinus sp. IW2-2015 (Arctic char): 111973770
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Entry
111973770 CDS
T05762
Name
(RefSeq) synaptic vesicle glycoprotein 2C isoform X1
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111973770
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
salp02000
]
111973770
Transporters [BR:
salp02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
111973770
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar_tr
MFS_1
MFS_2
Pentapeptide_3
Pentapeptide_4
MFS_4
DUF6057
Pentapeptide
Motif
Other DBs
NCBI-GeneID:
111973770
NCBI-ProteinID:
XP_023856941
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All DBs
Position
LG15:27278090..27314366
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AA seq
642 aa
AA seq
DB search
MDDSYENRTSLVKGAKDIAKEAKRHAVKKVNKVVDSTTDEYSQRKYSRFEDEVDEGDDFY
RNPPRQDGGYNDNDQASDASDATEGHDDEDEIYEGEYQGIPAAGDRRAREGQVALGQPVT
DSLKDRKELEQERQADEEELAQQYELIIQECGHGRFQWQLFLVLGLALMSDGVEVFVVGF
VLPSAETDMCALGGSNSRSGWLGSIVYLGMMVGAFFWGGMSDKVGRRQCLLICMCVNGFF
AFLSSFVQGYGIFLFCRMIAGFGTGGVVPIVFSLFAEVLSREKRGEHLSWLCMFWMIGEI
YASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVCAVVALTFMPESPRFYLEVG
KHDEAWMILKQIHDTNMRARGQPEKVFTVNRIKIPKHLDELVEIKSESGNPVSKALFRSK
TELCGIWVNFMKCFDYPLKESTIKLAIVWFTLSFGYYGLSVWFPDVIKHLQADDYASKVK
IHSNERIEDFTFNFTMENQIHTNGVFINDRFVNMKLKSITFIDSTFRNCYFDDVTSVGSY
FRNCTFIEAFFYNTDIDDSKLIDGTEVINSTFHHNKTGCQMTFDDDYSAYWVYFINFLGT
LAVLPGNIVSALLMDKIGRLSMLGGSNGSVRDQLFLPVVRHQ
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagctacgaaaacaggacttccttagtgaagggggccaaagacatcgccaag
gaggccaagcggcacgctgtgaaaaaggtcaacaaggtcgtggacagcaccacagacgag
tactcccagcgcaaatacagccgtttcgaggacgaggtggacgagggggacgacttttac
cgtaaccctcccaggcaggacggaggctacaatgacaacgaccaggccagtgatgccagc
gacgccacagagggccatgatgacgaagatgagatctacgaaggggagtaccagggaatc
ccagcggccggagacaggcgggccagggaggggcaggtggctctggggcagcccgtcaca
gacagcctgaaagaccgtaaggagctggagcaggagaggcaggcggacgaggaggaactc
gcccagcagtatgagctgatcatccaggagtgtggccacggcaggttccagtggcagctg
ttcttggtgctgggcctggccctcatgtcagatggggtggaggtgttcgtggtggggttc
gttctacccagcgccgagacggacatgtgtgctctgggtggctccaactccagatctgga
tggctaggcagtattgtgtacctggggatgatggtgggggcgttcttctgggggggcatg
tcggacaaggtgggccgcagacagtgtctgctcatctgcatgtgtgtgaacggcttcttc
gccttcctgtcctccttcgttcagggttacggcatcttcctsttctgccgcatgatcgca
ggctttggaacagggggggttgtacccatcgtcttctccttatttgcggaggtgctgtcc
agagagaagagaggggagcacctgagctggctctgcatgttctggatgattggcgagatc
tatgcttcagccatggcctgggccattataccacactacggctggagtttcagtatgggt
tctgcctaccagttccacagttggagagtgtttgtggtcgtctgcgccctgccctgcgtt
tgtgctgtcgtggctctcactttcatgcccgagagccccaggttttacctggaggtgggg
aagcacgacgaggcttggatgatcctcaagcagatccatgacaccaacatgcgagcgcgt
gggcagccggagaaagtcttcaccgtgaacagaatcaagatccccaagcatttggatgag
ctggtggagatcaaatcagagtcggggaacccagtctccaaggccctcttcaggtccaag
acagagctatgtgggatctgggttaactttatgaagtgtttcgactaccctctgaaagaa
agcactatcaagctagctattgtttggtttacgctgtcatttgggtactacggcctgtct
gtgtggttccctgacgtcatcaagcacctccaggcagatgactacgcctccaaggtgaag
atccacagcaacgaacgcatcgaggacttcaccttcaatttcaccatggagaaccagatc
cacaccaatggtgtcttcatcaacgacagatttgttaatatgaagttgaagtccatcacc
ttcattgactcaaccttccgtaactgctactttgacgacgtgacgtcygtgggatcctac
ttccggaactgtaccttcatcgaggcgttcttctacaacactgacatcgatgactccaaa
ctgatagatggcacagaggtgatcaacagcacgtttcaccacaacaagacgggctgtcag
atgacatttgacgacgactacagcgcctactgggtctacttcatcaatttccttggaact
ctggctgttctgcccggcaacatcgtctcggcactgctcatggataaaatcggacgcctt
tccatgttaggtggctccaatggttctgtcagggatcagttgtttcttcctgtggttcgg
caccagtga
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