Salvelinus sp. IW2-2015 (Arctic char): 111973774
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Entry
111973774 CDS
T05762
Name
(RefSeq) double-stranded RNA-specific editase 1-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
salp03041
]
111973774
Spliceosome [BR:
salp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111973774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
111973774
NCBI-ProteinID:
XP_023856948
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All DBs
Position
LG2:complement(7989751..8198528)
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AA seq
698 aa
AA seq
DB search
MDVDEEENMSSSSTDVKENRNLDNVSSKEGEAVAEQLPNGSGGGSRKRPLEEGNNGHTHS
KFRAKKRKKTPGPVLPKNALMQLNEIKPGLLYKLLSQTGPVHAPVFVMTVEVNGQLFEGS
GPTKKKAKLNAAEKALRSFVQFPNASEAHLAMGRTLTVNTDFTSDQADFPDMLFNGFETP
AQPEDSFYLGSNGSGCLNSLGEYSISSNPGANLAQALLPPPSSFTSPSSGKNPVMILNEL
RPGLKYDFLSESGESHAKNFVMQVSVDSQQFEGSGRNKKLAKARAAQAALSALFNMQLDQ
TPSRQPIPREGLQLHLPQVLADAVSRLVVDKFSELTDNFTSPHARRKVLAGVVMTTGSDV
KEAQVICVSTGTKCINGEYMSDRGLALNDCHAEIIARRSLIRYLYAQLEHFLSSNKEEQL
KSIFMRCDKRGYRLKDNVLFHLYISTSPCGDARIFSPHEAGMEDQGDRHPNRKARGQLRT
KIESGEGTIPVRTSNTIQTWDGVLQGERLLTMSCSDKIARWNVLGIQGSLMSYFTEPIYF
SSIILGSLYHADHLSRAMYQRIADIEDLPQQFSLNKPLLSGISNAEARQPGKAPNFSVNW
AVGDQALEVINATTGKDDMGRASRLCKHALYSRWVRLHSKLSSTLRIKVSKPSSYHDAKQ
AAVEYHNAKQTLIKVFHKSGLGAWVKKPTEQDQFSLNS
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggatgargaggagaacatgagttcgagcagcaccgacgtaaaggaaaaccgt
aacctggacaacgtctcctccaaagagggggaggctgtggctgagcagctccccaacggc
agtggcgggggcagcaggaagcgccccttagaggagggaaacaatggccacacgcactcc
aagttccgggccaagaagcgtaagaaaacgccaggcccggttctacccaagaatgccctt
atgcagctgaatgaaattaagccggggctgctgtataagctgctgtctcaaacgggtcca
gtccacgctcccgtgtttgtcatgaccgtcgaggtcaacgggcagctgttcgagggctca
ggtcccaccaagaagaaggccaagctgaatgcggcagagaaggccctgcgctcctttgtc
cagttccccaacgcctccgaagcrcacctggctatgggccggacactgacagtcaacacg
gacttcacatccgaccaggccgacttcccagacatgctcttcaacgggtttgagacgccc
gcacagcccgaggactccttttacctgggctccaatggcagcggctgcttaaactcgctg
ggagagtactccatttcttccaacccaggtgctaacttagcccaggccctgttgccccct
ccctcatccttcacctcgccctcgagcggcaagaaccctgtcatgatcctcaatgagctg
aggccgggmctcaagtatgactttttgtccgagagcggcgagagccatgcaaagaacttt
gtcatgcaggtgtcggtggactcacagcagttcgagggctctggacgaaacaagaagctg
gccaaggcccgggccgcccaggcagccctctcagccctcttcaacatgcagctggaccag
acgccctcccgacagcccatccccagagagggactgcagctccacctaccccaggtcctc
gccgacgcagtctctcgcctggttgtggacaagttcagcgagctgacggacaacttcact
tccccccacgcgcggcggaaagtcctggcaggggtcgtcatgacaacaggctcggacgtg
aaagaggcccaggtgatctgcgtctccacgggcaccaagtgcatcaacggcgagtacatg
agcgaccgcggcctggcgctcaacgactgccacgcagagattatcgcccgccgctcgctc
atccggtacctctacgcccagctggagcacttcctragcagcaacaaggaggaacagctg
aagtctatattcatgcgctgtgacaagcgtggctaccggctgaaggacaacgtcctgttc
cacctctacatcagcacctcrccctgcggagacgcgcgcatcttctcgccgcacgaggcc
ggcatggaagaccaaggagaccgacaccccaaccggaaggcgcgaggccagctgaggacc
aaaatagagtctggggaggggaccattccagtgaggaccagcaacaccatccagacatgg
gacggggtgctgcagggagagaggctgctcaccatgtcctgcagtgacaagatcgcaaga
tggaacgtgctgggcatccagggctctctgatgagctacttcacggagcccatctacttc
tccagcatcatcctgggcagcctgtaccacgccgaccacctctcccgggctatgtaccag
cgcatcgccgacatcgaggacctgccccaacagttcagcctcaacaagcctctactgagc
ggcatcagtaacgcggaggcgaggcagccgggcaaggcacccaatttcagcgtgaactgg
gcggtgggcgaccaggcgctggaggtcatcaatgctaccacgggcaaagacgacatgggg
cgcgcctcgcgcctctgcaagcacgccctctacagccgctgggttcgcctgcattccaag
ctgtcatccacactgaggatcaaggtgtccaagcccagctcgtaccacgacgccaagcag
gcggcggtggagtaccacaacgccaagcagacgctcatcaaggtcttccacaagtcgggc
ctgggggcctgggtgaagaagcccaccgagcaggaccagttctccctcaactcctga
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