Salvelinus sp. IW2-2015 (Arctic char): 111973830
Help
Entry
111973830 CDS
T05762
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04137
Mitophagy - animal
salp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111973830
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111973830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111973830
03009 Ribosome biogenesis [BR:
salp03009
]
111973830
04131 Membrane trafficking [BR:
salp04131
]
111973830
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111973830
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
111973830
Ribosome biogenesis [BR:
salp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
111973830
Membrane trafficking [BR:
salp04131
]
SNARE
SNARE associated proteins
Others
111973830
Autophagy
Aggrephagy
Other aggrephagy associated proteins
111973830
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111973830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
nSTAND3
AAA_28
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_7
AAA_18
ATPase
ABC_tran
DUF815
AAA_24
NB-ARC
TsaE
ResIII
Viral_helicase1
Sigma54_activat
NACHT
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
111973830
NCBI-ProteinID:
XP_023857018
LinkDB
All DBs
Position
LG15:26016860..26026949
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKTRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLMK
GKKRRESVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPNPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDAALRRF
GRFDKEVDIGIPDATGRLEILQIHTKNMKLNDDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWGDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRINILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRECIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSNAAGG
SGPSQGTGGTAGGPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggggggagaatccaaaaatgatgacctttccactgcgattctgaagcagaag
accagaccaaacagattgattgtcgatgaatccatcaatgaggacaacagtgtggtctct
ctctctcaggcaaagatggatgagctgcagctgttccgtggcgacacagtgctgatgaag
gggaagaagcgcagggagtctgtgtgtattgtcctgtctgacgacacctgctctgatgag
aaggtccgcatgaaccgtgtggtccgcaacaatctccgtgtccgtctgggggatgtcatc
agtatccagccatgtcctgatgtaaagtatgggaagaggattcatgttctgcctattgat
gacacagtcgaggggatcactggcaacctgtttgaggtctacctcaaaccctacttccta
gaggcctacaggcccatccgcaagggtgatatcttcctggttcgggggggtatgcgtgcg
gtggagttcaaggtggtagagaccgaccccaacccctactgcatcgtcgccccagataca
gtcatccactgcgagggagagcctatcaggagagaggatgaggaggagtccctgaatgag
gtgggctatgatgatatcggaggagtgaggaagcagctggctcagatcaaggagatggtt
gagctccctctcagacaccctgcactgttcaaggctataggagtcaagcccccccgtggt
atcctgctgtacggacctcccggtacaggaaagaccctgattgccagagctgtcgctaac
gagaccggcgccttcttcttcctcatcaacggtcctgagattatgagtaagctggctgga
gagagtgagagcaacctgaggaaggcctttgaggaggctgagaagaactcccctgccatc
atcttcattgatgaactggatgctatcgctcccaagagagagaagactcatggggaagtg
gagaggcgtatcgtgtctcagctgctgaccctgatggacgggctgaagcagagagctcat
gtcatcgtcatggcagccaccaacagaccaaacagcatagatgctgcgcttagaagattt
gggcgttttgacaaggaggtggacattggtatccccgatgctacaggcagactggagatc
ctgcagatccacaccaagaacatgaaactgaatgatgatgttgaccttgagcaggtggct
aatgagacccacggccacgtgggtgctgatctggctgccctgtgctcagaggctgctctc
caggccatcaggaagaagatggacctcatcgacctggaggacgagaccatcgatgcggag
gtcatgaactcccttgccgttaccatggacgactttaggtgggctttgagccagagtaac
ccatcagctctgagggagacagtggtggaggttcctaacatcacctggggggacatcgga
ggactggaagacgtcaagcgggagctgcaggagctggtgcagtacccagtggagcaccca
gataagttcctgaagttcggtatgaccccttcaaagggagtgttgttctacgggcctccg
ggttgcggtaagaccctgctggccaaggccattgccaacgagtgccaggctaacttcatc
tccattaaaggacctgagcttctcaccatgtggtttggagagtcagaggctaacgtcagg
gagatctttgacaaggctcgccaggcagccccatgtgtgttgttctttgacgagttggac
tccatagcgaaggcccgtggcggtaatgtgggagacggtggcggagcggccgaccgtgtc
atcaaccagatcctgactgagatggacggcatgtccagcaagaagaacgtcttcatcatt
ggcgccaccaatcgccctgacatcatcgaccctgccatcctccgacccggtcgtctggac
cagctcatatacatccctttgcctgacgagaagagcaggatcaatattctcaaggctaac
ctccggaagagccccattagcaaggatgttgatctggacttcctggctaagatgaccaat
ggtttctcgggtgctgaccttacagagatctgccagcgggcctgtaagctggctatcaga
gagtgcattgagaacgagattcgccgggagagggagaggcagaccaacccctctgctatg
gaggtggaggaagacgaccctgtgcctgagatcaggaaggaccactttgaggaggccatg
cgattcgcccgccgctccgtcagtgacaatgacatccgcaaatacgagatgtttgcccag
acactgcagcagagccgaggatttggcagcttcaggttcccctccaatgctgcagggggc
agcggtcccagccagggtactgggggcactgctggggggcccgtgtttaacgaggataat
gatgatgacctgtatggatag
DBGET
integrated database retrieval system
